Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01712 and H281DRAFT_01713 are separated by 198 nucleotides H281DRAFT_01713 and H281DRAFT_01714 are separated by 733 nucleotides
H281DRAFT_01712: H281DRAFT_01712 - polyphosphate kinase 2, PA0141 family, at 598,065 to 598,889
_01712
H281DRAFT_01713: H281DRAFT_01713 - Lysophospholipase, at 599,088 to 600,695
_01713
H281DRAFT_01714: H281DRAFT_01714 - hypothetical protein, at 601,429 to 602,211
_01714
Position (kb) 599
600
601 Strain fitness (log2 ratio) -2
-1
0
1 at 598.100 kb on - strand at 598.189 kb on - strand at 598.306 kb on + strand, within H281DRAFT_01712 at 598.420 kb on + strand, within H281DRAFT_01712 at 598.543 kb on + strand, within H281DRAFT_01712 at 598.610 kb on - strand, within H281DRAFT_01712 at 598.743 kb on + strand, within H281DRAFT_01712 at 598.744 kb on - strand, within H281DRAFT_01712 at 598.744 kb on - strand, within H281DRAFT_01712 at 598.744 kb on - strand, within H281DRAFT_01712 at 598.934 kb on - strand at 598.934 kb on - strand at 598.953 kb on - strand at 598.960 kb on + strand at 599.054 kb on - strand at 599.105 kb on + strand at 599.179 kb on - strand at 599.536 kb on + strand, within H281DRAFT_01713 at 599.898 kb on + strand, within H281DRAFT_01713 at 600.072 kb on + strand, within H281DRAFT_01713 at 600.313 kb on - strand, within H281DRAFT_01713 at 600.611 kb on - strand at 600.707 kb on + strand at 600.707 kb on + strand at 600.889 kb on - strand at 600.945 kb on - strand at 600.945 kb on - strand at 600.983 kb on + strand at 600.997 kb on + strand at 601.303 kb on - strand at 601.303 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 598,100 - -0.8 598,189 - +1.7 598,306 + H281DRAFT_01712 0.29 +1.1 598,420 + H281DRAFT_01712 0.43 +1.0 598,543 + H281DRAFT_01712 0.58 -0.5 598,610 - H281DRAFT_01712 0.66 -0.1 598,743 + H281DRAFT_01712 0.82 -0.3 598,744 - H281DRAFT_01712 0.82 -0.1 598,744 - H281DRAFT_01712 0.82 -0.4 598,744 - H281DRAFT_01712 0.82 +0.0 598,934 - -0.5 598,934 - -0.6 598,953 - -0.8 598,960 + -1.2 599,054 - -1.8 599,105 + -0.4 599,179 - +0.2 599,536 + H281DRAFT_01713 0.28 +0.3 599,898 + H281DRAFT_01713 0.50 +0.3 600,072 + H281DRAFT_01713 0.61 -0.9 600,313 - H281DRAFT_01713 0.76 +0.6 600,611 - -0.2 600,707 + +0.7 600,707 + -0.2 600,889 - +0.5 600,945 - +0.5 600,945 - +0.3 600,983 + -0.0 600,997 + -0.1 601,303 - -0.3 601,303 - -0.3
Or see this region's nucleotide sequence