Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00244 and H281DRAFT_00245 are separated by 142 nucleotides H281DRAFT_00245 and H281DRAFT_00246 are separated by 178 nucleotides H281DRAFT_00246 and H281DRAFT_00247 are separated by 159 nucleotides
H281DRAFT_00244: H281DRAFT_00244 - trehalose 6-phosphate synthase, at 261,021 to 262,448
_00244
H281DRAFT_00245: H281DRAFT_00245 - MFS transporter, DHA2 family, multidrug resistance protein, at 262,591 to 264,039
_00245
H281DRAFT_00246: H281DRAFT_00246 - phospholipid-binding protein, PBP family, at 264,218 to 264,721
_00246
H281DRAFT_00247: H281DRAFT_00247 - T/G mismatch-specific endonuclease, at 264,881 to 265,327
_00247
Position (kb) 262
263
264
265 Strain fitness (log2 ratio) -1
0
1
2 at 261.663 kb on + strand, within H281DRAFT_00244 at 261.691 kb on - strand, within H281DRAFT_00244 at 261.702 kb on - strand, within H281DRAFT_00244 at 262.026 kb on + strand, within H281DRAFT_00244 at 262.041 kb on + strand, within H281DRAFT_00244 at 262.134 kb on + strand, within H281DRAFT_00244 at 262.134 kb on + strand, within H281DRAFT_00244 at 262.135 kb on - strand, within H281DRAFT_00244 at 262.358 kb on + strand at 262.358 kb on + strand at 262.622 kb on - strand at 262.673 kb on + strand at 262.673 kb on + strand at 262.674 kb on - strand at 262.831 kb on - strand, within H281DRAFT_00245 at 262.831 kb on - strand, within H281DRAFT_00245 at 263.715 kb on - strand at 264.268 kb on + strand at 264.355 kb on - strand, within H281DRAFT_00246 at 264.412 kb on - strand, within H281DRAFT_00246 at 264.654 kb on + strand, within H281DRAFT_00246 at 264.655 kb on - strand, within H281DRAFT_00246 at 264.722 kb on + strand at 264.722 kb on + strand at 264.722 kb on + strand at 264.874 kb on + strand at 264.951 kb on - strand, within H281DRAFT_00247
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 261,663 + H281DRAFT_00244 0.45 +1.7 261,691 - H281DRAFT_00244 0.47 +1.4 261,702 - H281DRAFT_00244 0.48 +0.5 262,026 + H281DRAFT_00244 0.70 +2.5 262,041 + H281DRAFT_00244 0.71 +0.6 262,134 + H281DRAFT_00244 0.78 +1.3 262,134 + H281DRAFT_00244 0.78 -0.5 262,135 - H281DRAFT_00244 0.78 +0.9 262,358 + +1.3 262,358 + +1.6 262,622 - -0.2 262,673 + +1.2 262,673 + -0.1 262,674 - -1.3 262,831 - H281DRAFT_00245 0.17 -0.1 262,831 - H281DRAFT_00245 0.17 +0.6 263,715 - -1.0 264,268 + -0.2 264,355 - H281DRAFT_00246 0.27 +0.3 264,412 - H281DRAFT_00246 0.38 +0.9 264,654 + H281DRAFT_00246 0.87 +0.4 264,655 - H281DRAFT_00246 0.87 +0.3 264,722 + +0.9 264,722 + -0.2 264,722 + +0.9 264,874 + -0.3 264,951 - H281DRAFT_00247 0.16 +0.1
Or see this region's nucleotide sequence