Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00150 and H281DRAFT_00151 are separated by 206 nucleotides H281DRAFT_00151 and H281DRAFT_00152 are separated by 17 nucleotides H281DRAFT_00152 and H281DRAFT_00153 are separated by 460 nucleotides
H281DRAFT_00150: H281DRAFT_00150 - pantothenate synthetase, at 154,640 to 155,473
_00150
H281DRAFT_00151: H281DRAFT_00151 - condensin subunit ScpA, at 155,680 to 156,555
_00151
H281DRAFT_00152: H281DRAFT_00152 - Protein of unknown function (DUF3460), at 156,573 to 156,758
_00152
H281DRAFT_00153: H281DRAFT_00153 - autotransporter secretion outer membrane protein TamA, at 157,219 to 158,979
_00153
Position (kb) 155
156
157 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 155.558 kb on - strand at 156.590 kb on - strand at 156.590 kb on - strand at 156.590 kb on - strand at 156.596 kb on - strand, within H281DRAFT_00152 at 156.741 kb on - strand at 156.755 kb on - strand at 156.755 kb on - strand at 156.837 kb on - strand at 157.017 kb on + strand at 157.018 kb on - strand at 157.044 kb on + strand at 157.044 kb on + strand at 157.045 kb on - strand at 157.176 kb on + strand at 157.176 kb on + strand at 157.177 kb on - strand at 157.177 kb on - strand at 157.188 kb on + strand at 157.200 kb on + strand at 157.201 kb on - strand at 157.201 kb on - strand at 157.201 kb on - strand at 157.312 kb on + strand at 157.312 kb on + strand at 157.312 kb on + strand at 157.477 kb on + strand, within H281DRAFT_00153 at 157.477 kb on + strand, within H281DRAFT_00153 at 157.478 kb on - strand, within H281DRAFT_00153 at 157.478 kb on - strand, within H281DRAFT_00153 at 157.478 kb on - strand, within H281DRAFT_00153 at 157.509 kb on + strand, within H281DRAFT_00153 at 157.509 kb on + strand, within H281DRAFT_00153 at 157.509 kb on + strand, within H281DRAFT_00153
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 155,558 - -0.6 156,590 - +0.8 156,590 - +0.6 156,590 - +0.9 156,596 - H281DRAFT_00152 0.12 -1.0 156,741 - +0.8 156,755 - -2.1 156,755 - -0.5 156,837 - -0.4 157,017 + +0.4 157,018 - -0.3 157,044 + +0.3 157,044 + +0.8 157,045 - -1.5 157,176 + +0.0 157,176 + +1.0 157,177 - -0.3 157,177 - -1.5 157,188 + +0.6 157,200 + -3.7 157,201 - -0.6 157,201 - +0.5 157,201 - +0.8 157,312 + +0.7 157,312 + -0.0 157,312 + +0.0 157,477 + H281DRAFT_00153 0.15 +0.2 157,477 + H281DRAFT_00153 0.15 -2.5 157,478 - H281DRAFT_00153 0.15 +1.0 157,478 - H281DRAFT_00153 0.15 +1.0 157,478 - H281DRAFT_00153 0.15 -0.8 157,509 + H281DRAFT_00153 0.16 -0.6 157,509 + H281DRAFT_00153 0.16 +0.8 157,509 + H281DRAFT_00153 0.16 -0.4
Or see this region's nucleotide sequence