Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03801

Experiment: PYE_noCalcium 25C survival rep3 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep3 28 days
3,963,326	-				-0.2
3,963,363	+				+0.1
3,963,386	-				+0.1
3,964,189	+				-1.6
3,964,204	+				-1.4
3,964,207	-				-0.4
3,964,256	-				+0.3
3,964,271	-				+1.1
3,964,281	+				-2.1
3,964,281	+				-2.2
3,964,281	+				-1.9
3,964,289	-				-1.4
3,964,289	-				+2.9
3,964,291	+				+2.1
3,964,321	+				+1.0
3,964,332	+				-0.0
3,964,346	-				-0.2
3,964,371	+				-0.3
3,964,394	-				+0.6
3,964,394	-				-2.5
3,964,425	-				+0.5
3,964,453	+		CCNA_03801	0.11	-1.5
3,964,461	+		CCNA_03801	0.11	+0.3
3,964,461	+		CCNA_03801	0.11	+0.1
3,964,461	+		CCNA_03801	0.11	+0.4
3,964,461	+		CCNA_03801	0.11	-0.4
3,964,461	-		CCNA_03801	0.11	-2.8
3,964,461	-		CCNA_03801	0.11	+2.1
3,964,469	-		CCNA_03801	0.11	+1.1
3,964,469	-		CCNA_03801	0.11	-0.0
3,964,469	-		CCNA_03801	0.11	-1.8
3,964,479	-		CCNA_03801	0.12	+0.0
3,964,487	+		CCNA_03801	0.12	+1.9
3,964,495	-		CCNA_03801	0.13	-1.1
3,964,495	-		CCNA_03801	0.13	-2.3
3,964,505	+		CCNA_03801	0.13	-0.1
3,964,505	+		CCNA_03801	0.13	-1.6
3,964,505	+		CCNA_03801	0.13	-0.9
3,964,505	+		CCNA_03801	0.13	-0.6
3,964,505	+		CCNA_03801	0.13	+1.0
3,964,505	+		CCNA_03801	0.13	+0.4
3,964,513	-		CCNA_03801	0.13	-0.7
3,964,513	-		CCNA_03801	0.13	-1.2
3,964,513	-		CCNA_03801	0.13	-2.2
3,964,513	-		CCNA_03801	0.13	-2.2
3,964,538	-		CCNA_03801	0.15	+0.5
3,964,538	-		CCNA_03801	0.15	-0.5
3,964,545	+		CCNA_03801	0.15	-0.8
3,964,576	-		CCNA_03801	0.16	-0.5
3,964,583	+		CCNA_03801	0.17	-2.2
3,964,583	+		CCNA_03801	0.17	-0.6
3,964,605	+		CCNA_03801	0.18	+0.2
3,964,605	+		CCNA_03801	0.18	+0.7
3,964,607	+		CCNA_03801	0.18	+0.3
3,964,637	-		CCNA_03801	0.19	-1.2
3,964,642	+		CCNA_03801	0.19	+0.4
3,964,668	-		CCNA_03801	0.20	-0.5
3,964,695	-		CCNA_03801	0.21	-3.5
3,964,701	+		CCNA_03801	0.22	-0.1
3,964,754	-		CCNA_03801	0.24	+0.5
3,964,777	-		CCNA_03801	0.25	-3.3
3,964,797	-		CCNA_03801	0.26	+2.1
3,964,797	-		CCNA_03801	0.26	+0.1
3,964,807	-		CCNA_03801	0.26	-1.1
3,964,845	-		CCNA_03801	0.28	+1.1
3,964,851	+		CCNA_03801	0.28	-0.6
3,964,851	+		CCNA_03801	0.28	+0.4
3,964,851	+		CCNA_03801	0.28	-1.2
3,964,851	+		CCNA_03801	0.28	-0.5
3,964,851	+		CCNA_03801	0.28	+0.1
3,964,851	+		CCNA_03801	0.28	-0.2
3,964,859	-		CCNA_03801	0.29	-0.3
3,964,859	-		CCNA_03801	0.29	-1.5
3,964,882	+		CCNA_03801	0.30	-0.7
3,964,897	+		CCNA_03801	0.30	+0.3
3,964,919	-		CCNA_03801	0.31	+0.5
3,964,933	+		CCNA_03801	0.32	-0.2
3,964,933	+		CCNA_03801	0.32	-0.2
3,964,941	-		CCNA_03801	0.32	+0.3
3,964,941	-		CCNA_03801	0.32	+0.3
3,964,946	-		CCNA_03801	0.33	-1.7
3,964,957	+		CCNA_03801	0.33	+1.9
3,964,957	-		CCNA_03801	0.33	+0.1
3,964,970	-		CCNA_03801	0.34	-0.9
3,964,992	-		CCNA_03801	0.35	-0.1
3,964,994	+		CCNA_03801	0.35	+0.7
3,964,994	+		CCNA_03801	0.35	-3.3
3,965,002	-		CCNA_03801	0.35	+0.3
3,965,014	+		CCNA_03801	0.36	-0.9
3,965,019	+		CCNA_03801	0.36	-0.9
3,965,019	+		CCNA_03801	0.36	-1.5
3,965,022	-		CCNA_03801	0.36	-0.2
3,965,022	-		CCNA_03801	0.36	-1.5
3,965,034	+		CCNA_03801	0.36	-0.8
3,965,083	-		CCNA_03801	0.39	-1.4
3,965,093	+		CCNA_03801	0.39	-1.0
3,965,112	+		CCNA_03801	0.40	-0.9
3,965,115	-		CCNA_03801	0.40	-0.5
3,965,155	-		CCNA_03801	0.42	-0.3
3,965,166	+		CCNA_03801	0.42	-0.3
3,965,172	+		CCNA_03801	0.43	-0.1
3,965,172	+				-1.8
3,965,173	-		CCNA_03801	0.43	+2.1
3,965,180	-		CCNA_03801	0.43	-0.5
3,965,180	-		CCNA_03801	0.43	-0.5
3,965,182	+		CCNA_03801	0.43	+0.5
3,965,192	+		CCNA_03801	0.43	+0.5
3,965,192	+		CCNA_03801	0.43	+0.4
3,965,192	+		CCNA_03801	0.43	-0.2
3,965,247	+		CCNA_03801	0.46	-3.4
3,965,252	+		CCNA_03801	0.46	-1.4
3,965,252	+		CCNA_03801	0.46	-1.1
3,965,252	+		CCNA_03801	0.46	+2.4
3,965,252	+		CCNA_03801	0.46	+0.2
3,965,252	+		CCNA_03801	0.46	-0.4
3,965,252	+		CCNA_03801	0.46	-0.7
3,965,252	+		CCNA_03801	0.46	-0.8
3,965,253	+		CCNA_03801	0.46	-0.3
3,965,260	-		CCNA_03801	0.46	-0.2
3,965,260	-		CCNA_03801	0.46	-0.2
3,965,261	-		CCNA_03801	0.47	+2.1
3,965,261	-		CCNA_03801	0.47	-0.9
3,965,284	+		CCNA_03801	0.48	-0.7
3,965,300	+		CCNA_03801	0.48	+0.4
3,965,308	-		CCNA_03801	0.49	-0.5
3,965,350	+		CCNA_03801	0.50	-1.1
3,965,350	+		CCNA_03801	0.50	-2.2
3,965,350	+		CCNA_03801	0.50	-1.6
3,965,350	+		CCNA_03801	0.50	-2.1
3,965,350	+		CCNA_03801	0.50	-3.1
3,965,358	-		CCNA_03801	0.51	+3.4
3,965,358	-		CCNA_03801	0.51	+1.1
3,965,358	-		CCNA_03801	0.51	-1.1
3,965,365	-		CCNA_03801	0.51	-2.0
3,965,372	+		CCNA_03801	0.51	+0.7
3,965,402	+		CCNA_03801	0.53	-2.9
3,965,455	+		CCNA_03801	0.55	-0.7
3,965,467	+		CCNA_03801	0.56	-0.8
3,965,475	-		CCNA_03801	0.56	-2.0
3,965,475	-		CCNA_03801	0.56	-1.1
3,965,475	-		CCNA_03801	0.56	-1.7
3,965,493	-		CCNA_03801	0.57	-1.6
3,965,495	+		CCNA_03801	0.57	-1.6
3,965,495	+		CCNA_03801	0.57	-3.6
3,965,496	+		CCNA_03801	0.57	-0.9
3,965,503	-		CCNA_03801	0.57	-3.0
3,965,529	+		CCNA_03801	0.58	+0.2
3,965,538	-		CCNA_03801	0.59	+2.8
3,965,538	-		CCNA_03801	0.59	+1.3
3,965,570	+		CCNA_03801	0.60	-0.1
3,965,570	+		CCNA_03801	0.60	-0.2
3,965,580	+		CCNA_03801	0.61	-1.6
3,965,580	+		CCNA_03801	0.61	-0.9
3,965,605	+		CCNA_03801	0.62	-0.6
3,965,613	-		CCNA_03801	0.62	-1.4
3,965,651	+		CCNA_03801	0.64	-1.1
3,965,674	-		CCNA_03801	0.65	+0.5
3,965,681	+		CCNA_03801	0.65	+0.2
3,965,691	+		CCNA_03801	0.66	-0.7
3,965,700	+		CCNA_03801	0.66	-2.5
3,965,707	+		CCNA_03801	0.66	-1.7
3,965,738	+		CCNA_03801	0.68	+0.1
3,965,754	+		CCNA_03801	0.68	+0.8
3,965,755	-		CCNA_03801	0.68	+0.6
3,965,786	+		CCNA_03801	0.70	+0.3
3,965,794	+		CCNA_03801	0.70	-1.4
3,965,803	+		CCNA_03801	0.70	+1.4
3,965,811	-		CCNA_03801	0.71	+2.1
3,965,820	-		CCNA_03801	0.71	-1.7
3,965,849	+		CCNA_03801	0.73	-2.5
3,965,849	+		CCNA_03801	0.73	-0.5
3,965,849	+		CCNA_03801	0.73	-0.2
3,965,849	+		CCNA_03801	0.73	+1.6
3,965,857	-		CCNA_03801	0.73	-2.3
3,965,857	-		CCNA_03801	0.73	-1.2
3,965,870	+		CCNA_03801	0.73	-0.3
3,965,880	-		CCNA_03801	0.74	-2.1
3,965,880	-		CCNA_03801	0.74	-3.2
3,965,880	-		CCNA_03801	0.74	+0.1
3,965,913	-		CCNA_03801	0.75	+0.3
3,965,916	+		CCNA_03801	0.75	-0.4
3,965,916	+		CCNA_03801	0.75	-0.8
3,965,916	+		CCNA_03801	0.75	+0.3
3,965,921	+		CCNA_03801	0.76	-0.2
3,965,938	+		CCNA_03801	0.76	-2.5
3,965,966	+		CCNA_03801	0.78	-1.9
3,966,027	-		CCNA_03801	0.80	-0.7
3,966,051	+		CCNA_03801	0.81	+0.0
3,966,051	+		CCNA_03801	0.81	+1.6
3,966,053	+		CCNA_03801	0.82	-2.2
3,966,079	+		CCNA_03801	0.83	-2.1
3,966,203	+		CCNA_03801	0.88	-0.2
3,966,215	+		CCNA_03801	0.89	+0.4
3,966,244	-				-1.6
3,966,263	+				-0.7
3,966,263	+				-0.3
3,966,263	+				-1.9
3,966,271	-				-2.5
3,966,276	+				-1.3
3,966,304	-				-3.5
3,966,348	-				-1.2
3,966,356	+				+0.5
3,966,371	+				+1.1
3,966,400	+				-1.7
3,966,426	+				+0.7
3,966,426	+				-1.5
3,966,426	+				+1.3
3,966,431	+				+1.8
3,966,431	+				-0.6
3,966,431	+				-0.8
3,966,431	+				-0.2
3,966,434	-				+0.3
3,966,434	-				-1.4
3,966,434	-				-1.4
3,966,439	-				-1.5
3,966,439	-				+2.1
3,966,439	-				-2.9
3,966,439	-				-1.1
3,966,444	-				-1.2
3,966,455	+				+1.2
3,966,473	+				+0.3
3,966,479	+				-0.2
3,966,515	-				+0.0
3,966,516	+				+0.3
3,966,516	+				+0.5
3,966,516	+				-0.3
3,966,516	+				-0.4
3,966,524	-				-0.7
3,966,589	+				+3.7
3,966,589	+				-0.4
3,966,597	-				-0.2
3,966,599	+				-1.8
3,966,607	-				-1.3
3,966,607	-				-0.6
3,966,607	-				-2.5
3,966,610	+				+2.1
3,966,653	+				+0.0
3,966,658	+				+0.7
3,966,658	+				-0.9
3,966,661	-				-1.5
3,966,662	-				-0.2
3,966,666	+				+1.0
3,966,719	+		CCNA_03802	0.11	+1.2
3,966,725	+		CCNA_03802	0.12	+0.8
3,966,727	-		CCNA_03802	0.12	+0.7
3,966,732	+		CCNA_03802	0.12	-1.4
3,966,732	+		CCNA_03802	0.12	-0.3
3,966,733	-		CCNA_03802	0.12	+3.7
3,966,733	-		CCNA_03802	0.12	+0.1
3,966,733	-		CCNA_03802	0.12	-1.9
3,966,740	-		CCNA_03802	0.12	-2.8
3,966,740	-		CCNA_03802	0.12	-0.4
3,966,740	-		CCNA_03802	0.12	-0.7
3,966,740	-		CCNA_03802	0.12	-1.0
3,966,785	+		CCNA_03802	0.15	-0.3
3,966,812	+		CCNA_03802	0.16	+0.5
3,966,812	+		CCNA_03802	0.16	+1.4
3,966,820	-		CCNA_03802	0.16	-2.0
3,966,839	+		CCNA_03802	0.17	-0.7
3,966,863	-		CCNA_03802	0.18	+0.5
3,966,911	+		CCNA_03802	0.20	-0.0
3,966,911	+		CCNA_03802	0.20	+0.9
3,966,911	+		CCNA_03802	0.20	+0.2
3,966,911	+		CCNA_03802	0.20	-0.3
3,966,919	-		CCNA_03802	0.21	-0.7
3,966,919	-		CCNA_03802	0.21	+1.1
3,966,919	-		CCNA_03802	0.21	+2.1
3,966,919	-		CCNA_03802	0.21	+0.1
3,966,919	-		CCNA_03802	0.21	+1.2
3,966,936	+		CCNA_03802	0.22	+0.1
3,966,990	-		CCNA_03802	0.24	-1.1
3,966,992	+		CCNA_03802	0.24	-0.1
3,967,039	+		CCNA_03802	0.26	-0.4
3,967,041	+		CCNA_03802	0.26	-1.5
3,967,049	-		CCNA_03802	0.27	-1.4
3,967,063	+		CCNA_03802	0.27	-1.2
3,967,071	-		CCNA_03802	0.28	-2.1
3,967,073	+		CCNA_03802	0.28	+0.5
3,967,073	+		CCNA_03802	0.28	-0.1
3,967,073	+		CCNA_03802	0.28	-0.2
3,967,081	-		CCNA_03802	0.28	-1.1
3,967,088	+		CCNA_03802	0.29	-2.2
3,967,088	+		CCNA_03802	0.29	+0.2
3,967,088	+		CCNA_03802	0.29	+1.5
3,967,096	-		CCNA_03802	0.29	-0.0
3,967,096	-		CCNA_03802	0.29	-1.5
3,967,096	-		CCNA_03802	0.29	+0.9
3,967,111	+		CCNA_03802	0.30	-0.8
3,967,124	-		CCNA_03802	0.30	+0.5
3,967,161	+		CCNA_03802	0.32	+0.4
3,967,165	+		CCNA_03802	0.32	-1.5
3,967,166	+		CCNA_03802	0.32	-0.5
3,967,169	-		CCNA_03802	0.32	-1.9
3,967,169	-		CCNA_03802	0.32	-0.9
3,967,189	+		CCNA_03802	0.33	-1.6
3,967,201	+		CCNA_03802	0.34	-0.3
3,967,207	-		CCNA_03802	0.34	-0.2
3,967,211	+		CCNA_03802	0.34	-1.2
3,967,211	+		CCNA_03802	0.34	+1.1
3,967,229	-		CCNA_03802	0.35	-2.4
3,967,229	-		CCNA_03802	0.35	+2.1
3,967,245	+		CCNA_03802	0.36	-0.5
3,967,268	+		CCNA_03802	0.37	+0.4
3,967,275	+		CCNA_03802	0.37	+0.5
3,967,288	-		CCNA_03802	0.38	+1.9
3,967,343	+		CCNA_03802	0.40	-0.2
3,967,347	-		CCNA_03802	0.41	-0.0
3,967,375	-		CCNA_03802	0.42	-1.1
3,967,377	+		CCNA_03802	0.42	+1.2
3,967,387	+		CCNA_03802	0.42	+0.5
3,967,392	+		CCNA_03802	0.43	-0.6
3,967,392	+		CCNA_03802	0.43	+0.2
3,967,392	+		CCNA_03802	0.43	+0.1
3,967,395	-		CCNA_03802	0.43	+2.1
3,967,397	+		CCNA_03802	0.43	-0.5
3,967,400	-		CCNA_03802	0.43	+0.1
3,967,400	-		CCNA_03802	0.43	-2.2
3,967,400	-				-2.0
3,967,400	-		CCNA_03802	0.43	-0.2
3,967,405	-		CCNA_03802	0.43	-1.9
3,967,431	+		CCNA_03802	0.45	-0.9
3,967,436	+		CCNA_03802	0.45	+0.7
3,967,439	-		CCNA_03802	0.45	-0.7
3,967,439	-		CCNA_03802	0.45	+0.1
3,967,439	-		CCNA_03802	0.45	-3.1
3,967,444	-		CCNA_03802	0.45	+0.1
3,967,453	+		CCNA_03802	0.46	+0.6