Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03179

Experiment: PYE_noCalcium 25C survival rep3 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep3 28 days
3,337,281	+				-0.6
3,337,283	-				+0.7
3,337,347	-				+0.3
3,337,347	-				+1.3
3,337,347	-				-0.7
3,337,361	+				-2.8
3,337,369	-				-0.4
3,337,478	-				+1.2
3,337,582	+				-0.8
3,337,585	+				-0.1
3,337,619	+				+0.4
3,337,625	+				-1.1
3,337,632	+				-1.4
3,337,654	+				+0.9
3,337,671	+				-1.5
3,337,677	-				-1.7
3,337,679	-				-0.2
3,337,707	+				-2.3
3,337,707	+				-2.0
3,337,715	-				+0.3
3,337,721	+				-1.7
3,337,729	-				-0.2
3,337,747	-		CCNA_03178	0.10	+2.4
3,337,808	+		CCNA_03178	0.27	+2.2
3,337,808	+		CCNA_03178	0.27	-3.3
3,337,857	+		CCNA_03178	0.41	+0.9
3,337,857	+		CCNA_03178	0.41	+1.2
3,337,857	-		CCNA_03178	0.41	+1.3
3,337,881	-		CCNA_03178	0.48	-0.0
3,337,911	-		CCNA_03178	0.56	+1.9
3,337,911	-		CCNA_03178	0.56	+0.9
3,337,923	+		CCNA_03178	0.60	+0.2
3,338,003	-		CCNA_03178	0.82	-0.6
3,338,003	-		CCNA_03178	0.82	+0.3
3,338,008	-		CCNA_03178	0.83	+0.0
3,338,020	-		CCNA_03178	0.87	+1.4
3,338,033	-				+1.0
3,338,092	-				-2.1
3,338,119	+				-2.2
3,338,193	-				+0.6
3,338,193	-				-1.5
3,338,240	-				-0.9
3,338,271	+				-0.6
3,338,271	+				+0.0
3,338,271	+				-2.5
3,338,271	+				-0.8
3,338,271	+				+1.6
3,338,271	+				-2.6
3,338,279	-				+1.2
3,338,303	+		CCNA_03179	0.12	-1.6
3,338,362	+		CCNA_03179	0.16	-1.4
3,338,362	+		CCNA_03179	0.16	-2.4
3,338,386	+		CCNA_03179	0.18	-0.9
3,338,388	+		CCNA_03179	0.18	-0.6
3,338,396	+		CCNA_03179	0.19	+1.0
3,338,396	+		CCNA_03179	0.19	+0.0
3,338,396	+		CCNA_03179	0.19	+1.1
3,338,396	+		CCNA_03179	0.19	-2.1
3,338,396	+		CCNA_03179	0.19	+0.6
3,338,404	-		CCNA_03179	0.20	-0.8
3,338,404	-		CCNA_03179	0.20	+1.0
3,338,404	-		CCNA_03179	0.20	-1.5
3,338,404	-		CCNA_03179	0.20	+0.2
3,338,416	+		CCNA_03179	0.21	-1.2
3,338,423	-		CCNA_03179	0.21	+0.8
3,338,443	-		CCNA_03179	0.23	+1.6
3,338,493	-		CCNA_03179	0.27	-3.7
3,338,493	-		CCNA_03179	0.27	+0.9
3,338,493	-		CCNA_03179	0.27	+0.7
3,338,493	-		CCNA_03179	0.27	+0.9
3,338,503	-		CCNA_03179	0.27	+0.4
3,338,519	-		CCNA_03179	0.29	-1.5
3,338,545	-		CCNA_03179	0.31	+1.0
3,338,606	-		CCNA_03179	0.36	-2.5
3,338,619	-		CCNA_03179	0.37	+0.2
3,338,624	-		CCNA_03179	0.37	+1.1
3,338,624	-		CCNA_03179	0.37	+1.2
3,338,670	+		CCNA_03179	0.41	-0.1
3,338,670	+		CCNA_03179	0.41	-2.2
3,338,673	-		CCNA_03179	0.41	-0.4
3,338,680	+				-0.6
3,338,680	+		CCNA_03179	0.41	+1.6
3,338,687	+		CCNA_03179	0.42	-2.3
3,338,687	+		CCNA_03179	0.42	-2.0
3,338,695	-		CCNA_03179	0.42	+0.2
3,338,736	+		CCNA_03179	0.46	-0.4
3,338,760	-		CCNA_03179	0.48	-3.0
3,338,760	-		CCNA_03179	0.48	-1.3
3,338,784	+		CCNA_03179	0.49	-2.6
3,338,784	+		CCNA_03179	0.49	-1.3
3,338,784	+		CCNA_03179	0.49	+0.7
3,338,792	-		CCNA_03179	0.50	-1.7
3,338,841	-		CCNA_03179	0.54	-1.1
3,338,841	-				-0.1
3,338,891	-		CCNA_03179	0.58	-0.7
3,338,901	+		CCNA_03179	0.59	-0.4
3,338,914	+		CCNA_03179	0.60	+1.9
3,338,923	-		CCNA_03179	0.60	+0.9
3,338,923	-		CCNA_03179	0.60	-1.0
3,338,925	+		CCNA_03179	0.60	+0.5
3,338,934	+		CCNA_03179	0.61	+1.2
3,338,948	-		CCNA_03179	0.62	+0.9
3,338,963	+		CCNA_03179	0.63	-1.6
3,338,992	+		CCNA_03179	0.66	+0.5
3,339,002	+		CCNA_03179	0.67	-2.6
3,339,006	-		CCNA_03179	0.67	-2.2
3,339,019	+		CCNA_03179	0.68	-2.6
3,339,163	+		CCNA_03179	0.79	-0.9
3,339,169	+		CCNA_03179	0.80	-1.9
3,339,177	-		CCNA_03179	0.80	-0.5
3,339,182	+		CCNA_03179	0.81	+0.6
3,339,187	+		CCNA_03179	0.81	-3.7
3,339,192	+		CCNA_03179	0.81	-0.3
3,339,192	+		CCNA_03179	0.81	-1.7
3,339,200	-		CCNA_03179	0.82	-1.1
3,339,200	-		CCNA_03179	0.82	-3.3
3,339,206	-		CCNA_03179	0.82	+0.4
3,339,216	+		CCNA_03179	0.83	-0.8
3,339,242	-		CCNA_03179	0.85	-0.6
3,339,245	+		CCNA_03179	0.86	-2.8
3,339,283	+		CCNA_03179	0.88	-1.0
3,339,283	+		CCNA_03179	0.88	-1.8
3,339,283	+		CCNA_03179	0.88	-1.3
3,339,283	+		CCNA_03179	0.88	-0.6
3,339,291	-		CCNA_03179	0.89	-2.4
3,339,291	-		CCNA_03179	0.89	-0.0
3,339,298	+		CCNA_03179	0.90	-2.3
3,339,384	+				+2.2
3,339,390	+				-0.5
3,339,390	+				-1.2
3,339,423	+				+0.9
3,339,423	+				+0.5
3,339,431	-				+0.0
3,339,431	-				+0.0
3,339,431	-				-0.4
3,339,433	+				-3.7
3,339,584	+		CCNA_03180	0.23	+0.5
3,339,590	+		CCNA_03180	0.24	-0.6
3,339,598	+		CCNA_03180	0.25	-2.1
3,339,600	+		CCNA_03180	0.25	+0.2
3,339,613	+		CCNA_03180	0.27	+2.2
3,339,620	+		CCNA_03180	0.28	+1.1
3,339,663	+		CCNA_03180	0.34	+0.3
3,339,673	-		CCNA_03180	0.35	-2.1
3,339,688	-		CCNA_03180	0.37	+0.4
3,339,748	+		CCNA_03180	0.45	+2.2
3,339,751	-		CCNA_03180	0.46	-0.7
3,339,751	-		CCNA_03180	0.46	-1.2
3,339,756	-		CCNA_03180	0.46	+0.5
3,339,799	-		CCNA_03180	0.52	-1.3
3,339,809	+		CCNA_03180	0.54	-2.5
3,339,810	+		CCNA_03180	0.54	-0.1
3,339,817	-		CCNA_03180	0.55	-0.1
3,339,828	-		CCNA_03180	0.56	+0.6
3,339,828	-		CCNA_03180	0.56	+0.9
3,339,828	-		CCNA_03180	0.56	-0.5
3,339,853	-		CCNA_03180	0.60	-1.8
3,339,875	+		CCNA_03180	0.63	-1.4
3,339,961	+		CCNA_03180	0.74	-1.6
3,339,962	+		CCNA_03180	0.75	-0.4
3,339,969	-		CCNA_03180	0.76	+0.6
3,339,972	+		CCNA_03180	0.76	-1.8
3,339,980	-		CCNA_03180	0.77	+1.7
3,339,986	+		CCNA_03180	0.78	-2.4
3,339,994	-		CCNA_03180	0.79	-4.5
3,340,062	+		CCNA_03180	0.88	-0.1
3,340,081	-				-1.8
3,340,081	-				-0.5
3,340,088	-				-3.4
3,340,136	-				+0.0
3,340,249	-				+0.0
3,340,253	+				+1.2
3,340,253	+				+4.8
3,340,253	+				+0.6
3,340,253	+				+2.5
3,340,253	+				-0.6
3,340,253	+				-0.4
3,340,253	+				-1.8
3,340,253	+				-2.7
3,340,253	+				-1.3
3,340,253	+				-1.9
3,340,253	+				-2.0
3,340,261	-				+0.6
3,340,261	-				+0.7
3,340,261	-				-0.7
3,340,261	-				-0.6
3,340,261	-				-2.3
3,340,261	-				-0.4
3,340,261	-				+2.4
3,340,261	-				-1.3
3,340,320	-				-0.1
3,340,327	-				-1.5
3,340,355	+				+0.6