Experiment: sodium bromide 0.0125 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_36 and Pf6N2E2_37 are separated by 233 nucleotides Pf6N2E2_37 and Pf6N2E2_38 are separated by 83 nucleotides
Pf6N2E2_36 - Possible oxidoreductase, at 75,774 to 76,604
_36
Pf6N2E2_37 - 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I, at 76,838 to 77,194
_37
Pf6N2E2_38 - FIG00954456: hypothetical protein, at 77,278 to 78,357
_38
Position (kb)
76
77
78 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 76.003 kb on + strand, within Pf6N2E2_36 at 76.003 kb on + strand, within Pf6N2E2_36 at 76.003 kb on + strand, within Pf6N2E2_36 at 76.075 kb on + strand, within Pf6N2E2_36 at 76.076 kb on - strand, within Pf6N2E2_36 at 76.076 kb on - strand, within Pf6N2E2_36 at 76.126 kb on + strand, within Pf6N2E2_36 at 76.126 kb on + strand, within Pf6N2E2_36 at 76.126 kb on + strand, within Pf6N2E2_36 at 76.126 kb on + strand, within Pf6N2E2_36 at 76.126 kb on + strand, within Pf6N2E2_36 at 76.126 kb on + strand, within Pf6N2E2_36 at 76.126 kb on + strand, within Pf6N2E2_36 at 76.127 kb on - strand, within Pf6N2E2_36 at 76.127 kb on - strand, within Pf6N2E2_36 at 76.127 kb on - strand, within Pf6N2E2_36 at 76.127 kb on - strand, within Pf6N2E2_36 at 76.127 kb on - strand, within Pf6N2E2_36 at 76.127 kb on - strand, within Pf6N2E2_36 at 76.127 kb on - strand, within Pf6N2E2_36 at 76.127 kb on - strand, within Pf6N2E2_36 at 76.153 kb on + strand, within Pf6N2E2_36 at 76.153 kb on + strand, within Pf6N2E2_36 at 76.153 kb on + strand, within Pf6N2E2_36 at 76.154 kb on - strand, within Pf6N2E2_36 at 76.154 kb on - strand, within Pf6N2E2_36 at 76.154 kb on - strand, within Pf6N2E2_36 at 76.272 kb on + strand, within Pf6N2E2_36 at 76.438 kb on + strand, within Pf6N2E2_36 at 76.438 kb on + strand, within Pf6N2E2_36 at 76.438 kb on + strand, within Pf6N2E2_36 at 76.438 kb on + strand, within Pf6N2E2_36 at 76.438 kb on + strand, within Pf6N2E2_36 at 76.438 kb on + strand, within Pf6N2E2_36 at 76.438 kb on + strand, within Pf6N2E2_36 at 76.438 kb on + strand, within Pf6N2E2_36 at 76.439 kb on - strand, within Pf6N2E2_36 at 76.439 kb on - strand, within Pf6N2E2_36 at 76.439 kb on - strand, within Pf6N2E2_36 at 76.439 kb on - strand, within Pf6N2E2_36 at 76.439 kb on - strand, within Pf6N2E2_36 at 76.439 kb on - strand, within Pf6N2E2_36 at 76.439 kb on - strand, within Pf6N2E2_36 at 76.439 kb on - strand, within Pf6N2E2_36 at 76.489 kb on + strand, within Pf6N2E2_36 at 76.489 kb on + strand, within Pf6N2E2_36 at 76.489 kb on + strand, within Pf6N2E2_36 at 76.490 kb on - strand, within Pf6N2E2_36 at 76.490 kb on - strand, within Pf6N2E2_36 at 76.576 kb on + strand at 76.577 kb on - strand at 76.577 kb on - strand at 76.644 kb on + strand at 76.645 kb on - strand at 76.645 kb on - strand at 76.739 kb on + strand at 76.739 kb on + strand at 76.740 kb on - strand at 76.851 kb on + strand at 76.851 kb on + strand at 76.852 kb on - strand at 76.852 kb on - strand at 76.852 kb on - strand at 76.852 kb on - strand at 76.852 kb on - strand at 76.986 kb on + strand, within Pf6N2E2_37 at 76.986 kb on + strand, within Pf6N2E2_37 at 76.986 kb on + strand, within Pf6N2E2_37 at 76.986 kb on + strand, within Pf6N2E2_37 at 76.987 kb on - strand, within Pf6N2E2_37 at 76.987 kb on - strand, within Pf6N2E2_37 at 76.987 kb on - strand, within Pf6N2E2_37 at 77.007 kb on + strand, within Pf6N2E2_37 at 77.209 kb on + strand at 77.209 kb on + strand at 77.210 kb on - strand at 77.242 kb on + strand at 77.243 kb on - strand at 77.280 kb on - strand at 77.376 kb on - strand at 77.422 kb on - strand, within Pf6N2E2_38 at 77.459 kb on + strand, within Pf6N2E2_38 at 77.460 kb on - strand, within Pf6N2E2_38 at 77.597 kb on + strand, within Pf6N2E2_38 at 77.598 kb on - strand, within Pf6N2E2_38 at 77.616 kb on - strand, within Pf6N2E2_38 at 77.639 kb on + strand, within Pf6N2E2_38 at 78.065 kb on + strand, within Pf6N2E2_38 at 78.065 kb on + strand, within Pf6N2E2_38 at 78.065 kb on + strand, within Pf6N2E2_38 at 78.065 kb on + strand, within Pf6N2E2_38 at 78.065 kb on + strand, within Pf6N2E2_38 at 78.065 kb on + strand, within Pf6N2E2_38 at 78.065 kb on + strand, within Pf6N2E2_38 at 78.066 kb on - strand, within Pf6N2E2_38 at 78.066 kb on - strand, within Pf6N2E2_38 at 78.066 kb on - strand, within Pf6N2E2_38
Per-strain Table
Position Strand Gene LocusTag Fraction sodium bromide 0.0125 M remove 76,003 + Pf6N2E2_36 0.28 +1.1 76,003 + Pf6N2E2_36 0.28 -0.1 76,003 + Pf6N2E2_36 0.28 -0.4 76,075 + Pf6N2E2_36 0.36 -0.4 76,076 - Pf6N2E2_36 0.36 +0.3 76,076 - Pf6N2E2_36 0.36 -0.6 76,126 + Pf6N2E2_36 0.42 -0.7 76,126 + Pf6N2E2_36 0.42 -0.5 76,126 + Pf6N2E2_36 0.42 -0.1 76,126 + Pf6N2E2_36 0.42 -1.5 76,126 + Pf6N2E2_36 0.42 +0.6 76,126 + Pf6N2E2_36 0.42 +0.4 76,126 + Pf6N2E2_36 0.42 +0.3 76,127 - Pf6N2E2_36 0.42 +1.4 76,127 - Pf6N2E2_36 0.42 +0.9 76,127 - Pf6N2E2_36 0.42 -0.7 76,127 - Pf6N2E2_36 0.42 -0.5 76,127 - Pf6N2E2_36 0.42 +0.9 76,127 - Pf6N2E2_36 0.42 -0.4 76,127 - Pf6N2E2_36 0.42 -0.7 76,127 - Pf6N2E2_36 0.42 -0.9 76,153 + Pf6N2E2_36 0.46 +1.0 76,153 + Pf6N2E2_36 0.46 +0.5 76,153 + Pf6N2E2_36 0.46 +0.3 76,154 - Pf6N2E2_36 0.46 -1.3 76,154 - Pf6N2E2_36 0.46 -0.8 76,154 - Pf6N2E2_36 0.46 -0.5 76,272 + Pf6N2E2_36 0.60 +1.5 76,438 + Pf6N2E2_36 0.80 +0.4 76,438 + Pf6N2E2_36 0.80 -0.2 76,438 + Pf6N2E2_36 0.80 +0.4 76,438 + Pf6N2E2_36 0.80 +0.4 76,438 + Pf6N2E2_36 0.80 -0.1 76,438 + Pf6N2E2_36 0.80 -0.6 76,438 + Pf6N2E2_36 0.80 +0.2 76,438 + Pf6N2E2_36 0.80 +0.4 76,439 - Pf6N2E2_36 0.80 +0.0 76,439 - Pf6N2E2_36 0.80 -2.3 76,439 - Pf6N2E2_36 0.80 +0.5 76,439 - Pf6N2E2_36 0.80 +0.5 76,439 - Pf6N2E2_36 0.80 -0.4 76,439 - Pf6N2E2_36 0.80 +0.6 76,439 - Pf6N2E2_36 0.80 +0.1 76,439 - Pf6N2E2_36 0.80 +1.8 76,489 + Pf6N2E2_36 0.86 -0.6 76,489 + Pf6N2E2_36 0.86 +0.9 76,489 + Pf6N2E2_36 0.86 +0.6 76,490 - Pf6N2E2_36 0.86 -0.9 76,490 - Pf6N2E2_36 0.86 +1.0 76,576 + -0.4 76,577 - -0.7 76,577 - +0.2 76,644 + +0.1 76,645 - +0.1 76,645 - -0.2 76,739 + -1.5 76,739 + -0.7 76,740 - -0.1 76,851 + -1.6 76,851 + -0.5 76,852 - +0.4 76,852 - -1.6 76,852 - -0.8 76,852 - -0.9 76,852 - -0.4 76,986 + Pf6N2E2_37 0.41 -0.7 76,986 + Pf6N2E2_37 0.41 +1.1 76,986 + Pf6N2E2_37 0.41 -1.9 76,986 + Pf6N2E2_37 0.41 +0.9 76,987 - Pf6N2E2_37 0.42 -0.6 76,987 - Pf6N2E2_37 0.42 -0.7 76,987 - Pf6N2E2_37 0.42 -3.3 77,007 + Pf6N2E2_37 0.47 -1.8 77,209 + -1.6 77,209 + -0.9 77,210 - -0.7 77,242 + -1.2 77,243 - +0.5 77,280 - +0.3 77,376 - +1.2 77,422 - Pf6N2E2_38 0.13 +0.1 77,459 + Pf6N2E2_38 0.17 +0.0 77,460 - Pf6N2E2_38 0.17 -0.5 77,597 + Pf6N2E2_38 0.30 +0.3 77,598 - Pf6N2E2_38 0.30 -1.8 77,616 - Pf6N2E2_38 0.31 -0.2 77,639 + Pf6N2E2_38 0.33 +0.1 78,065 + Pf6N2E2_38 0.73 -1.3 78,065 + Pf6N2E2_38 0.73 -0.2 78,065 + Pf6N2E2_38 0.73 -0.3 78,065 + Pf6N2E2_38 0.73 -1.0 78,065 + Pf6N2E2_38 0.73 -1.4 78,065 + Pf6N2E2_38 0.73 +0.3 78,065 + Pf6N2E2_38 0.73 +0.4 78,066 - Pf6N2E2_38 0.73 +0.6 78,066 - Pf6N2E2_38 0.73 +0.3 78,066 - Pf6N2E2_38 0.73 -0.4
Or see this region's nucleotide sequence