Experiment: Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_21785 and IAI47_21790 are separated by 221 nucleotides IAI47_21790 and IAI47_21795 are separated by 502 nucleotides
IAI47_21785: IAI47_21785 - SgcJ/EcaC family oxidoreductase, at 102,813 to 103,259
_21785
IAI47_21790: IAI47_21790 - helix-turn-helix domain-containing protein, at 103,481 to 104,077
_21790
IAI47_21795: IAI47_21795 - DUF2382 domain-containing protein, at 104,580 to 106,052
_21795
Position (kb) 103
104
105 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 102.496 kb on - strand at 102.516 kb on - strand at 102.518 kb on + strand at 102.536 kb on + strand at 102.540 kb on + strand at 102.541 kb on - strand at 102.546 kb on - strand at 102.644 kb on - strand at 102.648 kb on - strand at 102.649 kb on + strand at 102.668 kb on + strand at 102.671 kb on + strand at 102.677 kb on + strand at 102.677 kb on + strand at 102.677 kb on + strand at 102.677 kb on + strand at 102.677 kb on + strand at 102.677 kb on + strand at 102.678 kb on - strand at 102.718 kb on - strand at 102.727 kb on + strand at 102.728 kb on - strand at 102.755 kb on + strand at 102.755 kb on + strand at 102.758 kb on - strand at 102.788 kb on - strand at 102.799 kb on + strand at 102.812 kb on + strand at 102.813 kb on - strand at 102.824 kb on + strand at 102.825 kb on - strand at 102.836 kb on - strand at 102.887 kb on - strand, within IAI47_21785 at 102.916 kb on + strand, within IAI47_21785 at 102.917 kb on - strand, within IAI47_21785 at 102.964 kb on + strand, within IAI47_21785 at 103.047 kb on + strand, within IAI47_21785 at 103.140 kb on + strand, within IAI47_21785 at 103.140 kb on + strand, within IAI47_21785 at 103.140 kb on + strand, within IAI47_21785 at 103.140 kb on + strand, within IAI47_21785 at 103.140 kb on + strand, within IAI47_21785 at 103.141 kb on - strand, within IAI47_21785 at 103.141 kb on - strand, within IAI47_21785 at 103.142 kb on + strand, within IAI47_21785 at 103.142 kb on + strand, within IAI47_21785 at 103.142 kb on + strand, within IAI47_21785 at 103.143 kb on - strand, within IAI47_21785 at 103.143 kb on - strand, within IAI47_21785 at 103.148 kb on + strand, within IAI47_21785 at 103.148 kb on + strand, within IAI47_21785 at 103.149 kb on - strand, within IAI47_21785 at 103.149 kb on - strand, within IAI47_21785 at 103.160 kb on + strand, within IAI47_21785 at 103.160 kb on + strand, within IAI47_21785 at 103.161 kb on - strand, within IAI47_21785 at 103.161 kb on - strand, within IAI47_21785 at 103.171 kb on + strand, within IAI47_21785 at 103.190 kb on + strand, within IAI47_21785 at 103.190 kb on + strand, within IAI47_21785 at 103.190 kb on + strand, within IAI47_21785 at 103.191 kb on - strand, within IAI47_21785 at 103.191 kb on - strand, within IAI47_21785 at 103.191 kb on - strand, within IAI47_21785 at 103.191 kb on - strand, within IAI47_21785 at 103.194 kb on + strand, within IAI47_21785 at 103.194 kb on + strand, within IAI47_21785 at 103.194 kb on + strand, within IAI47_21785 at 103.194 kb on + strand, within IAI47_21785 at 103.194 kb on + strand, within IAI47_21785 at 103.194 kb on + strand, within IAI47_21785 at 103.194 kb on + strand, within IAI47_21785 at 103.194 kb on + strand, within IAI47_21785 at 103.195 kb on - strand, within IAI47_21785 at 103.195 kb on - strand, within IAI47_21785 at 103.195 kb on - strand, within IAI47_21785 at 103.195 kb on - strand, within IAI47_21785 at 103.195 kb on - strand, within IAI47_21785 at 103.195 kb on - strand, within IAI47_21785 at 103.195 kb on - strand, within IAI47_21785 at 103.292 kb on + strand at 103.292 kb on + strand at 103.292 kb on + strand at 103.293 kb on - strand at 103.293 kb on - strand at 103.293 kb on - strand at 103.293 kb on - strand at 103.296 kb on + strand at 103.296 kb on + strand at 103.296 kb on + strand at 103.296 kb on + strand at 103.296 kb on + strand at 103.296 kb on + strand at 103.296 kb on + strand at 103.297 kb on - strand at 103.297 kb on - strand at 103.297 kb on - strand at 103.297 kb on - strand at 103.297 kb on - strand at 103.297 kb on - strand at 103.297 kb on - strand at 103.297 kb on - strand at 103.304 kb on + strand at 103.315 kb on + strand at 103.316 kb on - strand at 103.316 kb on - strand at 103.316 kb on - strand at 103.318 kb on + strand at 103.318 kb on + strand at 103.425 kb on + strand at 103.425 kb on + strand at 103.426 kb on - strand at 103.426 kb on - strand at 103.482 kb on + strand at 103.482 kb on + strand at 103.482 kb on + strand at 103.483 kb on - strand at 103.483 kb on - strand at 103.591 kb on - strand, within IAI47_21790 at 103.613 kb on + strand, within IAI47_21790 at 103.615 kb on + strand, within IAI47_21790 at 103.616 kb on - strand, within IAI47_21790 at 103.652 kb on - strand, within IAI47_21790 at 103.652 kb on - strand, within IAI47_21790 at 103.652 kb on - strand, within IAI47_21790 at 103.677 kb on + strand, within IAI47_21790 at 103.678 kb on - strand, within IAI47_21790 at 103.678 kb on - strand, within IAI47_21790 at 103.714 kb on - strand, within IAI47_21790 at 103.760 kb on + strand, within IAI47_21790 at 103.782 kb on + strand, within IAI47_21790 at 103.782 kb on + strand, within IAI47_21790 at 103.782 kb on + strand, within IAI47_21790 at 103.919 kb on - strand, within IAI47_21790 at 103.919 kb on - strand, within IAI47_21790 at 103.943 kb on + strand, within IAI47_21790 at 103.944 kb on - strand, within IAI47_21790 at 104.023 kb on - strand at 104.032 kb on + strand at 104.032 kb on + strand at 104.033 kb on - strand at 104.035 kb on + strand at 104.035 kb on + strand at 104.139 kb on + strand at 104.140 kb on - strand at 104.143 kb on + strand at 104.145 kb on + strand at 104.157 kb on - strand at 104.187 kb on - strand at 104.256 kb on + strand at 104.257 kb on - strand at 104.262 kb on - strand at 104.262 kb on - strand at 104.265 kb on + strand at 104.266 kb on - strand at 104.273 kb on + strand at 104.280 kb on - strand at 104.280 kb on - strand at 104.287 kb on + strand at 104.315 kb on - strand at 104.359 kb on + strand at 104.384 kb on + strand at 104.407 kb on - strand at 104.418 kb on + strand at 104.418 kb on + strand at 104.419 kb on - strand at 104.478 kb on + strand at 104.478 kb on + strand at 104.479 kb on - strand at 104.479 kb on - strand at 104.486 kb on - strand at 104.539 kb on + strand at 104.545 kb on + strand at 104.545 kb on + strand at 104.546 kb on - strand at 104.546 kb on - strand at 104.550 kb on - strand at 104.581 kb on + strand at 104.648 kb on + strand at 104.648 kb on + strand at 104.660 kb on + strand at 104.685 kb on + strand at 104.701 kb on + strand at 104.701 kb on + strand at 104.701 kb on + strand at 104.702 kb on - strand at 104.702 kb on - strand at 104.702 kb on - strand at 104.702 kb on - strand at 104.702 kb on - strand at 104.702 kb on - strand at 104.702 kb on - strand at 104.810 kb on + strand, within IAI47_21795 at 104.810 kb on + strand, within IAI47_21795 at 104.810 kb on + strand, within IAI47_21795 at 104.810 kb on + strand, within IAI47_21795 at 104.811 kb on - strand, within IAI47_21795 at 104.811 kb on - strand, within IAI47_21795 at 104.811 kb on - strand, within IAI47_21795 at 104.811 kb on - strand, within IAI47_21795 at 104.811 kb on - strand, within IAI47_21795 at 104.811 kb on - strand, within IAI47_21795 at 104.814 kb on + strand, within IAI47_21795 at 104.814 kb on + strand, within IAI47_21795 at 104.814 kb on + strand, within IAI47_21795 at 104.814 kb on + strand, within IAI47_21795 at 104.815 kb on - strand, within IAI47_21795 at 104.815 kb on - strand, within IAI47_21795 at 104.815 kb on - strand, within IAI47_21795 at 104.830 kb on - strand, within IAI47_21795 at 104.870 kb on + strand, within IAI47_21795 at 104.892 kb on - strand, within IAI47_21795 at 104.906 kb on + strand, within IAI47_21795 at 104.906 kb on + strand, within IAI47_21795 at 104.906 kb on + strand, within IAI47_21795 at 104.906 kb on + strand, within IAI47_21795 at 104.906 kb on + strand, within IAI47_21795 at 104.907 kb on - strand, within IAI47_21795 at 104.907 kb on - strand, within IAI47_21795 at 104.910 kb on - strand, within IAI47_21795 at 104.910 kb on - strand, within IAI47_21795 at 104.910 kb on - strand, within IAI47_21795 at 104.910 kb on - strand, within IAI47_21795 at 104.910 kb on - strand, within IAI47_21795 at 105.036 kb on - strand, within IAI47_21795 at 105.064 kb on + strand, within IAI47_21795 at 105.065 kb on - strand, within IAI47_21795
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 remove 102,496 - -1.6 102,516 - +0.7 102,518 + -1.3 102,536 + -1.0 102,540 + +0.2 102,541 - -0.3 102,546 - -0.2 102,644 - -0.6 102,648 - -0.3 102,649 + -1.1 102,668 + -1.8 102,671 + -0.5 102,677 + +0.7 102,677 + +0.5 102,677 + +0.2 102,677 + +0.4 102,677 + +0.3 102,677 + -0.7 102,678 - -0.8 102,718 - -0.3 102,727 + +0.1 102,728 - +1.5 102,755 + -1.8 102,755 + +0.1 102,758 - -2.0 102,788 - -3.4 102,799 + +1.5 102,812 + -0.4 102,813 - -0.1 102,824 + -0.1 102,825 - -2.0 102,836 - +0.4 102,887 - IAI47_21785 0.17 -1.4 102,916 + IAI47_21785 0.23 +0.9 102,917 - IAI47_21785 0.23 -0.5 102,964 + IAI47_21785 0.34 -1.3 103,047 + IAI47_21785 0.52 -0.3 103,140 + IAI47_21785 0.73 -0.2 103,140 + IAI47_21785 0.73 -2.0 103,140 + IAI47_21785 0.73 -0.1 103,140 + IAI47_21785 0.73 +1.2 103,140 + IAI47_21785 0.73 -0.7 103,141 - IAI47_21785 0.73 -1.8 103,141 - IAI47_21785 0.73 -1.1 103,142 + IAI47_21785 0.74 -0.6 103,142 + IAI47_21785 0.74 -1.9 103,142 + IAI47_21785 0.74 +1.4 103,143 - IAI47_21785 0.74 +0.7 103,143 - IAI47_21785 0.74 +1.0 103,148 + IAI47_21785 0.75 -0.5 103,148 + IAI47_21785 0.75 +0.2 103,149 - IAI47_21785 0.75 -1.2 103,149 - IAI47_21785 0.75 -1.8 103,160 + IAI47_21785 0.78 -1.3 103,160 + IAI47_21785 0.78 +0.4 103,161 - IAI47_21785 0.78 -0.6 103,161 - IAI47_21785 0.78 +0.3 103,171 + IAI47_21785 0.80 -1.3 103,190 + IAI47_21785 0.84 -0.2 103,190 + IAI47_21785 0.84 -0.3 103,190 + IAI47_21785 0.84 +1.9 103,191 - IAI47_21785 0.85 -1.8 103,191 - IAI47_21785 0.85 -1.6 103,191 - IAI47_21785 0.85 -1.4 103,191 - IAI47_21785 0.85 +0.4 103,194 + IAI47_21785 0.85 -0.2 103,194 + IAI47_21785 0.85 +0.1 103,194 + IAI47_21785 0.85 +0.4 103,194 + IAI47_21785 0.85 -0.1 103,194 + IAI47_21785 0.85 +0.4 103,194 + IAI47_21785 0.85 +1.2 103,194 + IAI47_21785 0.85 +0.0 103,194 + IAI47_21785 0.85 +0.7 103,195 - IAI47_21785 0.85 +0.2 103,195 - IAI47_21785 0.85 +2.0 103,195 - IAI47_21785 0.85 +0.2 103,195 - IAI47_21785 0.85 +0.8 103,195 - IAI47_21785 0.85 -0.1 103,195 - IAI47_21785 0.85 -1.3 103,195 - IAI47_21785 0.85 +0.4 103,292 + -0.1 103,292 + -1.3 103,292 + -0.8 103,293 - -1.3 103,293 - -0.2 103,293 - +2.2 103,293 - -0.6 103,296 + -0.8 103,296 + +3.9 103,296 + -0.3 103,296 + -0.3 103,296 + -0.3 103,296 + -0.2 103,296 + +0.5 103,297 - +0.9 103,297 - -0.6 103,297 - -2.0 103,297 - -0.1 103,297 - -0.2 103,297 - -1.4 103,297 - +0.7 103,297 - +0.6 103,304 + +0.4 103,315 + +0.0 103,316 - +0.5 103,316 - +1.0 103,316 - -1.5 103,318 + -0.0 103,318 + +1.0 103,425 + -0.0 103,425 + +1.1 103,426 - -0.3 103,426 - +0.4 103,482 + -0.1 103,482 + -0.0 103,482 + -0.3 103,483 - -0.9 103,483 - -0.2 103,591 - IAI47_21790 0.18 -1.0 103,613 + IAI47_21790 0.22 -0.4 103,615 + IAI47_21790 0.22 -0.7 103,616 - IAI47_21790 0.23 -0.9 103,652 - IAI47_21790 0.29 -1.2 103,652 - IAI47_21790 0.29 -2.6 103,652 - IAI47_21790 0.29 +2.2 103,677 + IAI47_21790 0.33 +0.7 103,678 - IAI47_21790 0.33 -1.6 103,678 - IAI47_21790 0.33 -0.0 103,714 - IAI47_21790 0.39 -0.5 103,760 + IAI47_21790 0.47 +1.1 103,782 + IAI47_21790 0.50 +0.4 103,782 + IAI47_21790 0.50 -0.7 103,782 + IAI47_21790 0.50 -0.6 103,919 - IAI47_21790 0.73 -1.9 103,919 - IAI47_21790 0.73 +0.3 103,943 + IAI47_21790 0.77 -0.1 103,944 - IAI47_21790 0.78 -2.7 104,023 - -0.3 104,032 + -2.4 104,032 + -0.3 104,033 - -1.2 104,035 + -0.4 104,035 + +0.2 104,139 + -1.0 104,140 - +0.5 104,143 + +0.3 104,145 + -2.3 104,157 - -0.4 104,187 - -0.9 104,256 + -0.3 104,257 - -0.8 104,262 - -0.1 104,262 - -0.0 104,265 + +0.7 104,266 - -1.3 104,273 + -1.6 104,280 - +1.0 104,280 - -0.8 104,287 + +1.2 104,315 - +0.6 104,359 + +0.7 104,384 + -2.4 104,407 - +2.2 104,418 + +1.7 104,418 + -0.2 104,419 - +0.2 104,478 + +0.8 104,478 + -0.1 104,479 - -1.2 104,479 - +0.1 104,486 - +0.0 104,539 + +0.4 104,545 + +1.4 104,545 + -0.2 104,546 - -1.5 104,546 - -0.1 104,550 - -0.2 104,581 + -0.5 104,648 + +2.2 104,648 + -1.4 104,660 + +1.5 104,685 + -0.8 104,701 + +1.2 104,701 + +0.3 104,701 + +0.8 104,702 - +2.0 104,702 - +0.9 104,702 - +0.2 104,702 - +0.1 104,702 - -1.8 104,702 - +0.1 104,702 - -0.0 104,810 + IAI47_21795 0.16 -1.2 104,810 + IAI47_21795 0.16 -0.5 104,810 + IAI47_21795 0.16 -1.3 104,810 + IAI47_21795 0.16 -0.3 104,811 - IAI47_21795 0.16 +0.7 104,811 - IAI47_21795 0.16 +1.1 104,811 - IAI47_21795 0.16 +0.1 104,811 - IAI47_21795 0.16 -0.5 104,811 - IAI47_21795 0.16 +0.5 104,811 - IAI47_21795 0.16 +1.0 104,814 + IAI47_21795 0.16 -0.9 104,814 + IAI47_21795 0.16 +0.0 104,814 + IAI47_21795 0.16 -0.8 104,814 + IAI47_21795 0.16 -0.5 104,815 - IAI47_21795 0.16 +0.8 104,815 - IAI47_21795 0.16 +1.2 104,815 - IAI47_21795 0.16 -0.1 104,830 - IAI47_21795 0.17 -1.5 104,870 + IAI47_21795 0.20 -0.2 104,892 - IAI47_21795 0.21 -1.2 104,906 + IAI47_21795 0.22 -0.3 104,906 + IAI47_21795 0.22 -0.4 104,906 + IAI47_21795 0.22 -1.2 104,906 + IAI47_21795 0.22 -0.2 104,906 + IAI47_21795 0.22 -0.7 104,907 - IAI47_21795 0.22 -0.4 104,907 - IAI47_21795 0.22 -0.6 104,910 - IAI47_21795 0.22 +0.2 104,910 - IAI47_21795 0.22 -0.1 104,910 - IAI47_21795 0.22 +1.2 104,910 - IAI47_21795 0.22 -0.1 104,910 - IAI47_21795 0.22 -0.3 105,036 - IAI47_21795 0.31 -0.3 105,064 + IAI47_21795 0.33 -0.1 105,065 - IAI47_21795 0.33 +1.1
Or see this region's nucleotide sequence