Strain Fitness in Pantoea sp. MT58 around IAI47_17200

Experiment: Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,639,478	+				-0.4
3,639,478	+				-0.3
3,639,478	+				-0.3
3,639,478	+				-1.2
3,639,478	+				+1.2
3,639,478	+				-0.1
3,639,478	+				+0.5
3,639,478	+				+1.5
3,639,478	+				+0.5
3,639,479	-				-0.8
3,639,479	-				+0.1
3,639,479	-				+0.1
3,639,479	-				-1.2
3,639,479	-				-1.1
3,639,479	-				+0.4
3,639,479	-				+1.1
3,639,479	-				-0.6
3,639,577	+		IAI47_17190	0.34	+1.2
3,639,577	+		IAI47_17190	0.34	+2.9
3,639,577	+		IAI47_17190	0.34	-0.0
3,639,577	+		IAI47_17190	0.34	+1.1
3,639,577	+		IAI47_17190	0.34	-0.4
3,639,577	+		IAI47_17190	0.34	+0.8
3,639,577	+		IAI47_17190	0.34	+0.8
3,639,577	+		IAI47_17190	0.34	+1.4
3,639,577	+		IAI47_17190	0.34	+0.0
3,639,577	+		IAI47_17190	0.34	+1.9
3,639,577	+		IAI47_17190	0.34	+0.0
3,639,578	-		IAI47_17190	0.34	-1.1
3,639,590	+		IAI47_17190	0.39	-1.2
3,639,590	+		IAI47_17190	0.39	+1.6
3,639,590	+		IAI47_17190	0.39	+1.1
3,639,590	+		IAI47_17190	0.39	+0.9
3,639,590	+		IAI47_17190	0.39	-1.9
3,639,590	+		IAI47_17190	0.39	-0.3
3,639,590	+		IAI47_17190	0.39	-0.4
3,639,590	+		IAI47_17190	0.39	+0.4
3,639,591	-		IAI47_17190	0.39	-1.9
3,639,591	-		IAI47_17190	0.39	-2.3
3,639,591	-		IAI47_17190	0.39	-1.8
3,639,591	-		IAI47_17190	0.39	-1.9
3,639,591	-		IAI47_17190	0.39	-1.9
3,639,591	-		IAI47_17190	0.39	-1.0
3,639,591	-		IAI47_17190	0.39	-0.5
3,639,591	-		IAI47_17190	0.39	+0.3
3,639,592	+		IAI47_17190	0.39	-0.2
3,639,592	+		IAI47_17190	0.39	+3.2
3,639,592	+		IAI47_17190	0.39	+2.7
3,639,592	+		IAI47_17190	0.39	+0.4
3,639,592	+		IAI47_17190	0.39	+1.5
3,639,593	-		IAI47_17190	0.40	-0.7
3,639,593	-		IAI47_17190	0.40	-1.7
3,639,593	-		IAI47_17190	0.40	-1.5
3,639,668	-		IAI47_17190	0.66	-1.4
3,639,685	+		IAI47_17190	0.72	-1.0
3,639,685	+		IAI47_17190	0.72	-0.2
3,639,685	+		IAI47_17190	0.72	-0.7
3,639,685	+		IAI47_17190	0.72	+4.1
3,639,685	+		IAI47_17190	0.72	+0.8
3,639,685	+		IAI47_17190	0.72	+1.1
3,639,685	+		IAI47_17190	0.72	-0.1
3,639,685	+		IAI47_17190	0.72	-0.1
3,639,685	+		IAI47_17190	0.72	-0.5
3,639,685	+		IAI47_17190	0.72	+1.8
3,639,685	+		IAI47_17190	0.72	+2.0
3,639,685	+		IAI47_17190	0.72	+2.5
3,639,685	+		IAI47_17190	0.72	+3.6
3,639,685	+		IAI47_17190	0.72	-0.1
3,639,685	+		IAI47_17190	0.72	+0.2
3,639,685	+		IAI47_17190	0.72	+0.8
3,639,685	+		IAI47_17190	0.72	-0.6
3,639,689	+		IAI47_17190	0.73	+1.6
3,639,689	+		IAI47_17190	0.73	-0.9
3,639,689	+		IAI47_17190	0.73	+1.3
3,639,689	+		IAI47_17190	0.73	-0.2
3,639,689	+		IAI47_17190	0.73	-0.5
3,639,689	+		IAI47_17190	0.73	+0.4
3,639,689	+		IAI47_17190	0.73	+0.7
3,639,689	+		IAI47_17190	0.73	+0.7
3,639,689	+		IAI47_17190	0.73	+0.9
3,639,689	+		IAI47_17190	0.73	+1.1
3,639,689	+		IAI47_17190	0.73	+0.9
3,639,689	+		IAI47_17190	0.73	+0.0
3,639,689	+		IAI47_17190	0.73	-0.2
3,639,689	+		IAI47_17190	0.73	-1.2
3,639,690	-		IAI47_17190	0.73	-2.1
3,639,690	-		IAI47_17190	0.73	-0.7
3,639,690	-		IAI47_17190	0.73	-1.6
3,639,690	-		IAI47_17190	0.73	-1.6
3,639,764	+				+1.1
3,639,764	+				+0.1
3,639,776	+				-0.6
3,639,868	+				-0.1
3,639,868	+				-1.2
3,639,868	+				-0.5
3,639,869	-				-0.8
3,639,917	+				+1.1
3,639,933	+				+0.2
3,639,934	-				-0.9
3,639,983	+		IAI47_17195	0.13	+0.4
3,640,371	+				-1.6
3,640,372	-				-1.4
3,640,372	-				-1.1
3,640,396	+				-0.7
3,640,396	+				-2.4
3,640,396	+				+1.0
3,640,397	-				-2.2
3,640,397	-				-0.6
3,640,427	+				+1.2
3,640,514	+				-2.0
3,640,515	-				-0.4
3,640,524	+				-1.2
3,640,524	+				-0.3
3,640,524	+				-0.2
3,640,525	-				-0.1
3,640,525	-				-1.6
3,640,525	-				-1.6
3,640,525	-				-0.7
3,640,525	-				-0.7
3,640,525	-				-0.0
3,640,525	-				-0.7
3,640,525	-				-0.5
3,640,525	-				-1.3
3,640,525	-				+0.4
3,640,536	-		IAI47_17200	0.11	-1.6
3,640,552	+		IAI47_17200	0.12	+1.9
3,640,553	-		IAI47_17200	0.13	-1.3
3,640,565	-		IAI47_17200	0.14	-0.4
3,640,565	-		IAI47_17200	0.14	-0.4
3,640,568	+		IAI47_17200	0.14	+0.2
3,640,568	+		IAI47_17200	0.14	-1.6
3,640,568	+		IAI47_17200	0.14	+0.2
3,640,590	-		IAI47_17200	0.17	-0.3
3,640,619	+		IAI47_17200	0.20	-0.2
3,640,619	+		IAI47_17200	0.20	-1.1
3,640,619	+		IAI47_17200	0.20	-1.3
3,640,620	-		IAI47_17200	0.20	+0.5
3,640,620	-		IAI47_17200	0.20	-0.4
3,640,712	+		IAI47_17200	0.31	-1.8
3,640,713	-		IAI47_17200	0.31	-2.7
3,640,713	-		IAI47_17200	0.31	-1.9
3,640,713	-		IAI47_17200	0.31	-0.3
3,640,715	+		IAI47_17200	0.31	-0.5
3,640,716	-		IAI47_17200	0.32	-0.3
3,640,967	+		IAI47_17200	0.61	-0.4
3,640,967	+		IAI47_17200	0.61	-1.3
3,640,968	-		IAI47_17200	0.61	-0.4
3,640,968	-		IAI47_17200	0.61	-1.6
3,640,980	+		IAI47_17200	0.62	-1.7
3,640,980	+		IAI47_17200	0.62	-0.3
3,640,980	+		IAI47_17200	0.62	-0.4
3,640,980	+		IAI47_17200	0.62	-0.7
3,640,980	+		IAI47_17200	0.62	-2.0
3,640,981	-		IAI47_17200	0.63	-1.8
3,640,981	-		IAI47_17200	0.63	-1.2
3,640,981	-		IAI47_17200	0.63	+0.0
3,640,981	-		IAI47_17200	0.63	-1.7
3,641,081	+		IAI47_17200	0.74	-1.7
3,641,082	-		IAI47_17200	0.74	+1.1
3,641,094	-		IAI47_17200	0.76	-1.6
3,641,099	+		IAI47_17200	0.76	-1.1
3,641,099	+		IAI47_17200	0.76	-1.6
3,641,100	-		IAI47_17200	0.76	+0.2
3,641,100	-		IAI47_17200	0.76	+0.1
3,641,100	-		IAI47_17200	0.76	-0.8
3,641,100	-		IAI47_17200	0.76	-0.7
3,641,103	+		IAI47_17200	0.77	+0.1
3,641,103	+		IAI47_17200	0.77	-1.4
3,641,104	-		IAI47_17200	0.77	-1.5
3,641,104	-		IAI47_17200	0.77	-2.1
3,641,104	-		IAI47_17200	0.77	+2.3
3,641,104	-		IAI47_17200	0.77	-1.5
3,641,119	-		IAI47_17200	0.79	-1.6
3,641,119	-		IAI47_17200	0.79	+0.6
3,641,119	-		IAI47_17200	0.79	-0.2
3,641,159	+		IAI47_17200	0.83	-1.5
3,641,159	+		IAI47_17200	0.83	+0.4
3,641,159	+		IAI47_17200	0.83	-0.2
3,641,159	+		IAI47_17200	0.83	-0.7
3,641,159	+		IAI47_17200	0.83	-0.9
3,641,159	+		IAI47_17200	0.83	-0.4
3,641,159	+		IAI47_17200	0.83	-0.3
3,641,159	+		IAI47_17200	0.83	+0.7
3,641,159	+		IAI47_17200	0.83	-0.8
3,641,159	+		IAI47_17200	0.83	-0.6
3,641,159	+		IAI47_17200	0.83	+2.5
3,641,159	+		IAI47_17200	0.83	-2.2
3,641,160	-		IAI47_17200	0.84	-0.4
3,641,160	-		IAI47_17200	0.84	-1.8
3,641,160	-		IAI47_17200	0.84	+0.1
3,641,160	-		IAI47_17200	0.84	-1.7
3,641,160	-		IAI47_17200	0.84	-0.1
3,641,160	-		IAI47_17200	0.84	-0.5
3,641,160	-		IAI47_17200	0.84	-1.5
3,641,163	+		IAI47_17200	0.84	+0.1
3,641,163	+		IAI47_17200	0.84	-0.1
3,641,163	+		IAI47_17200	0.84	-0.9
3,641,163	+		IAI47_17200	0.84	-1.8
3,641,163	+		IAI47_17200	0.84	-1.4
3,641,164	-		IAI47_17200	0.84	-0.1
3,641,164	-		IAI47_17200	0.84	-0.9
3,641,164	-		IAI47_17200	0.84	+0.9
3,641,169	-		IAI47_17200	0.85	-1.0
3,641,169	-		IAI47_17200	0.85	-0.5
3,641,169	-		IAI47_17200	0.85	+0.6
3,641,211	+		IAI47_17200	0.89	-1.0
3,641,211	+		IAI47_17200	0.89	-0.9
3,641,211	+		IAI47_17200	0.89	-1.6
3,641,211	+		IAI47_17200	0.89	+0.3
3,641,211	+		IAI47_17200	0.89	-1.5
3,641,212	-		IAI47_17200	0.90	-1.2
3,641,212	-		IAI47_17200	0.90	-0.1
3,641,212	-		IAI47_17200	0.90	+0.1
3,641,212	-		IAI47_17200	0.90	-1.5
3,641,212	-		IAI47_17200	0.90	-0.2
3,641,212	-		IAI47_17200	0.90	-1.9
3,641,235	+				-1.2
3,641,235	+				+0.6
3,641,235	+				-0.9
3,641,235	+				-1.9
3,641,236	-				+0.9
3,641,252	+				-1.5
3,641,252	+				+1.6
3,641,253	-				-0.5
3,641,260	+				+0.2
3,641,260	+				-0.6
3,641,260	+				-0.6
3,641,260	+				-1.2
3,641,260	+				+1.5
3,641,260	+				-0.5
3,641,260	+				-0.9
3,641,261	-				-0.9
3,641,261	-				-0.2
3,641,276	+				+1.5
3,641,276	+				+0.3
3,641,277	-				-0.9
3,641,277	-				-0.0
3,641,316	+				+1.8
3,641,316	+				-0.3
3,641,364	+		IAI47_17205	0.25	-0.6
3,641,541	+		IAI47_17205	0.89	+0.1
3,641,542	-				-1.4
3,641,542	-				-1.3
3,641,542	-				+0.6
3,641,567	+				-0.1
3,641,567	+				+1.2
3,641,568	-				-0.8
3,641,575	-				-1.2
3,641,575	-				+0.2
3,641,588	-				-0.2
3,641,588	-				-0.1
3,641,588	-				-0.3
3,641,594	+				+0.4
3,641,595	-				+0.4
3,641,634	-				-0.6
3,641,658	+		IAI47_17210	0.12	-0.9
3,641,659	-		IAI47_17210	0.12	+0.8
3,641,659	-		IAI47_17210	0.12	+0.6
3,641,734	+		IAI47_17210	0.22	+0.3
3,641,752	+		IAI47_17210	0.25	+0.1
3,641,753	-		IAI47_17210	0.25	-1.2
3,641,760	+		IAI47_17210	0.26	+0.5
3,641,761	-		IAI47_17210	0.26	+0.3
3,641,761	-		IAI47_17210	0.26	-0.4
3,641,792	-		IAI47_17210	0.30	+1.1
3,641,812	+		IAI47_17210	0.33	-0.1
3,641,813	-		IAI47_17210	0.33	+2.3
3,641,820	+		IAI47_17210	0.34	+0.0
3,641,820	+		IAI47_17210	0.34	+0.0
3,641,820	+		IAI47_17210	0.34	-0.6
3,641,821	-		IAI47_17210	0.34	-0.3
3,641,821	-		IAI47_17210	0.34	+0.1
3,641,842	+		IAI47_17210	0.37	-1.0
3,641,842	+		IAI47_17210	0.37	-1.7
3,641,842	+		IAI47_17210	0.37	-1.2
3,641,842	+		IAI47_17210	0.37	-0.4
3,641,843	-		IAI47_17210	0.38	-1.7
3,641,980	+		IAI47_17210	0.57	-0.3
3,641,981	-		IAI47_17210	0.57	+0.5
3,641,981	-		IAI47_17210	0.57	-1.0
3,642,114	+		IAI47_17210	0.75	-1.0
3,642,114	+		IAI47_17210	0.75	-1.1
3,642,114	+		IAI47_17210	0.75	-1.4
3,642,114	+		IAI47_17210	0.75	-1.5
3,642,114	+		IAI47_17210	0.75	-1.5
3,642,115	-		IAI47_17210	0.75	-0.0
3,642,115	-		IAI47_17210	0.75	+0.2
3,642,115	-		IAI47_17210	0.75	-1.1
3,642,115	-		IAI47_17210	0.75	+0.3
3,642,115	-		IAI47_17210	0.75	+0.4
3,642,115	-		IAI47_17210	0.75	-1.3
3,642,119	-		IAI47_17210	0.76	-1.3
3,642,119	-		IAI47_17210	0.76	+0.3
3,642,119	-		IAI47_17210	0.76	+0.0
3,642,119	-		IAI47_17210	0.76	+3.8
3,642,131	+		IAI47_17210	0.78	-1.9
3,642,197	+		IAI47_17210	0.87	-1.6
3,642,198	-		IAI47_17210	0.87	-0.2
3,642,198	-		IAI47_17210	0.87	+0.4
3,642,202	+		IAI47_17210	0.87	-1.2
3,642,203	-		IAI47_17210	0.88	-0.0
3,642,227	+				-0.9
3,642,227	+				-0.8
3,642,227	+				-1.6
3,642,228	-				+2.1
3,642,228	-				+1.4
3,642,228	-				-0.9
3,642,228	-				-0.6
3,642,233	+				+0.6
3,642,233	+				-0.8
3,642,233	+				-0.2
3,642,233	+				+1.0
3,642,234	-				-0.1
3,642,234	-				-0.3
3,642,234	-				+0.6
3,642,259	+				-1.1
3,642,260	-				-0.6
3,642,260	-				-0.1
3,642,260	-				+0.3
3,642,260	-				+0.8
3,642,280	+				-0.1
3,642,280	+				-0.8
3,642,280	+				-1.6
3,642,280	+				-1.7
3,642,281	-				-0.3
3,642,281	-				+0.9
3,642,281	-				+0.0
3,642,281	-				+2.1
3,642,281	-				-0.3
3,642,281	-				+0.3