Strain Fitness in Pantoea sp. MT58 around IAI47_13480

Experiment: Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,859,507	+		IAI47_13470	0.43	+0.5
2,859,508	-		IAI47_13470	0.44	+0.3
2,859,553	+		IAI47_13470	0.49	-1.0
2,859,553	+		IAI47_13470	0.49	-0.2
2,859,553	+		IAI47_13470	0.49	-0.3
2,859,553	+		IAI47_13470	0.49	-0.6
2,859,553	+		IAI47_13470	0.49	-0.7
2,859,553	+		IAI47_13470	0.49	+0.6
2,859,553	+		IAI47_13470	0.49	+0.2
2,859,553	+		IAI47_13470	0.49	+1.1
2,859,553	+		IAI47_13470	0.49	+1.0
2,859,553	+		IAI47_13470	0.49	-1.5
2,859,553	+		IAI47_13470	0.49	-0.4
2,859,554	-		IAI47_13470	0.49	-0.8
2,859,554	-		IAI47_13470	0.49	-0.0
2,859,637	+		IAI47_13470	0.60	+1.0
2,859,637	+		IAI47_13470	0.60	+1.2
2,859,637	+		IAI47_13470	0.60	+0.2
2,859,638	-		IAI47_13470	0.60	-0.7
2,859,675	+		IAI47_13470	0.65	-0.6
2,859,717	+		IAI47_13470	0.70	-1.1
2,859,717	+		IAI47_13470	0.70	+0.5
2,859,717	+		IAI47_13470	0.70	-0.0
2,859,717	+		IAI47_13470	0.70	+0.3
2,859,718	-		IAI47_13470	0.70	-0.1
2,859,783	+		IAI47_13470	0.78	+0.4
2,859,783	+		IAI47_13470	0.78	+1.4
2,859,784	-		IAI47_13470	0.79	-1.6
2,859,784	-		IAI47_13470	0.79	+1.0
2,859,816	-		IAI47_13470	0.83	-0.9
2,859,816	-		IAI47_13470	0.83	-0.7
2,859,816	-		IAI47_13470	0.83	+0.7
2,859,865	-		IAI47_13470	0.89	-0.2
2,859,865	-		IAI47_13470	0.89	-0.2
2,859,938	+				+0.7
2,859,938	+				-0.4
2,859,938	+				+0.8
2,859,939	-				+0.2
2,859,939	-				-2.8
2,859,939	-				+0.3
2,859,950	-				-0.6
2,859,961	+				+0.5
2,859,961	+				-1.1
2,859,961	+				+0.7
2,859,961	+				+0.4
2,859,961	+				-1.3
2,859,961	+				+0.2
2,859,961	+				-1.5
2,859,961	+				+0.4
2,859,962	-				+0.7
2,859,962	-				-0.8
2,859,962	-				+0.4
2,859,991	+				+0.5
2,859,991	+				+0.2
2,859,992	-				+0.9
2,859,992	-				+0.4
2,860,041	-				+0.1
2,860,051	+				-0.3
2,860,051	+				+0.7
2,860,156	+		IAI47_13475	0.23	-0.9
2,860,157	-		IAI47_13475	0.24	-0.3
2,860,163	+		IAI47_13475	0.25	+0.6
2,860,163	+		IAI47_13475	0.25	+0.6
2,860,268	+		IAI47_13475	0.48	+0.0
2,860,343	-		IAI47_13475	0.65	+1.3
2,860,370	+		IAI47_13475	0.71	+1.1
2,860,371	-		IAI47_13475	0.71	+0.4
2,860,450	+		IAI47_13475	0.88	-0.7
2,860,463	+				-1.4
2,860,653	+		IAI47_13480	0.61	+0.0
2,860,653	+		IAI47_13480	0.61	-0.2
2,860,654	-		IAI47_13480	0.61	-1.5
2,860,654	-		IAI47_13480	0.61	-0.6
2,860,743	+				-1.0
2,860,743	+				-1.0
2,860,743	+				+0.7
2,860,743	+				+2.2
2,860,743	+				-0.7
2,860,743	+				-2.4
2,860,744	-				+0.2
2,860,744	-				+0.0
2,860,744	-				+0.6
2,860,744	-				-0.5
2,860,744	-				+0.8
2,860,744	-				+0.6
2,860,819	+		IAI47_13485	0.16	-0.1
2,860,819	+		IAI47_13485	0.16	-0.4
2,860,820	-		IAI47_13485	0.16	+1.9
2,860,829	+		IAI47_13485	0.18	+0.0
2,860,829	+		IAI47_13485	0.18	+0.1
2,860,848	+		IAI47_13485	0.22	+0.3
2,860,848	+		IAI47_13485	0.22	-0.6
2,860,848	+		IAI47_13485	0.22	-0.7
2,860,848	+		IAI47_13485	0.22	+1.1
2,860,849	-		IAI47_13485	0.22	+2.2
2,860,849	-		IAI47_13485	0.22	+1.4
2,860,849	-		IAI47_13485	0.22	+1.5
2,860,849	-		IAI47_13485	0.22	+0.4
2,860,849	-		IAI47_13485	0.22	+0.6
2,860,849	-		IAI47_13485	0.22	+0.8
2,860,849	-		IAI47_13485	0.22	+1.9
2,860,930	+		IAI47_13485	0.39	+0.7
2,860,931	-		IAI47_13485	0.39	+0.4
2,860,946	-		IAI47_13485	0.42	+0.0
2,861,095	+		IAI47_13485	0.73	+1.1
2,861,095	+		IAI47_13485	0.73	+0.1
2,861,095	+		IAI47_13485	0.73	+0.2
2,861,096	-		IAI47_13485	0.73	-0.1
2,861,227	+				+0.3
2,861,227	+				-0.4
2,861,227	+				-1.1
2,861,227	+				+0.2
2,861,227	+				-1.0
2,861,227	+				+1.1
2,861,227	+				-1.0
2,861,227	+				-0.3
2,861,227	+				-2.9
2,861,227	+				-0.8
2,861,227	+				+0.4
2,861,227	+				+0.4
2,861,227	+				-0.6
2,861,227	+				+1.1
2,861,227	+				+0.4
2,861,227	+				+0.6
2,861,228	-				-0.3
2,861,228	-				-2.1
2,861,228	-				+1.8
2,861,228	-				+1.2
2,861,228	-				+0.6
2,861,228	-				-0.9
2,861,228	-				+1.0
2,861,228	-				+0.8
2,861,228	-				-0.1
2,861,228	-				+0.1
2,861,228	-				-1.0
2,861,228	-				-1.0
2,861,231	+				-2.3
2,861,231	+				+0.9
2,861,231	+				+1.4
2,861,232	-				-0.8
2,861,232	-				+1.2
2,861,232	-				-0.0
2,861,232	-				+0.4
2,861,232	-				+1.8
2,861,232	-				-0.1
2,861,232	-				+0.6
2,861,240	+				+0.3
2,861,268	+				+0.5
2,861,269	-				+0.0
2,861,304	+		IAI47_13490	0.13	-0.9
2,861,304	+		IAI47_13490	0.13	-0.2
2,861,305	-		IAI47_13490	0.13	-1.0
2,861,305	-		IAI47_13490	0.13	-0.8
2,861,323	-		IAI47_13490	0.16	+1.2
2,861,359	-		IAI47_13490	0.23	+2.9
2,861,423	+		IAI47_13490	0.36	-0.3
2,861,423	+		IAI47_13490	0.36	+0.4
2,861,423	+		IAI47_13490	0.36	+0.1
2,861,423	+		IAI47_13490	0.36	-0.1
2,861,423	+		IAI47_13490	0.36	-0.2
2,861,423	+		IAI47_13490	0.36	-0.4
2,861,423	+		IAI47_13490	0.36	+1.3
2,861,424	-		IAI47_13490	0.36	-0.4
2,861,511	+		IAI47_13490	0.53	+4.0
2,861,529	+		IAI47_13490	0.56	+0.2
2,861,530	-		IAI47_13490	0.56	+0.6
2,861,530	-		IAI47_13490	0.56	+1.4
2,861,532	+		IAI47_13490	0.57	+0.4
2,861,532	+		IAI47_13490	0.57	-0.9
2,861,532	+		IAI47_13490	0.57	+0.8
2,861,532	+		IAI47_13490	0.57	+0.5
2,861,533	-		IAI47_13490	0.57	-1.0
2,861,533	-		IAI47_13490	0.57	+0.5
2,861,545	+		IAI47_13490	0.59	-0.1
2,861,545	+		IAI47_13490	0.59	-1.5
2,861,545	+		IAI47_13490	0.59	+0.9
2,861,545	+		IAI47_13490	0.59	-0.3
2,861,545	+		IAI47_13490	0.59	+0.1
2,861,545	+		IAI47_13490	0.59	+1.3
2,861,545	+		IAI47_13490	0.59	+0.7
2,861,545	+		IAI47_13490	0.59	-0.8
2,861,545	+		IAI47_13490	0.59	-0.4
2,861,546	-		IAI47_13490	0.59	-1.2
2,861,546	-		IAI47_13490	0.59	-1.0
2,861,546	-		IAI47_13490	0.59	+0.4
2,861,546	-		IAI47_13490	0.59	-1.3
2,861,546	-		IAI47_13490	0.59	-0.8
2,861,546	-		IAI47_13490	0.59	-0.8
2,861,546	-		IAI47_13490	0.59	+2.9
2,861,546	-		IAI47_13490	0.59	-0.4
2,861,546	-		IAI47_13490	0.59	+0.8
2,861,546	-		IAI47_13490	0.59	-0.2
2,861,596	-		IAI47_13490	0.69	+0.9
2,861,599	-		IAI47_13490	0.70	+0.4
2,861,599	-		IAI47_13490	0.70	-0.1
2,861,660	+		IAI47_13490	0.82	-1.4
2,861,660	+		IAI47_13490	0.82	-0.1
2,861,661	-		IAI47_13490	0.82	-2.5
2,861,661	-		IAI47_13490	0.82	+0.2
2,861,674	-		IAI47_13490	0.84	+0.4
2,861,674	-		IAI47_13490	0.84	+2.6
2,861,749	-				-0.6