Strain Fitness in Pantoea sp. MT58 around IAI47_12770

Experiment: Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,689,478	-		IAI47_12765	0.24	+0.3
2,689,509	+		IAI47_12765	0.27	-1.5
2,689,509	+		IAI47_12765	0.27	-1.3
2,689,510	-		IAI47_12765	0.27	+0.8
2,689,582	+		IAI47_12765	0.33	-0.7
2,689,583	-		IAI47_12765	0.33	+0.4
2,689,600	+		IAI47_12765	0.34	+0.1
2,689,628	+		IAI47_12765	0.37	-0.1
2,689,628	+		IAI47_12765	0.37	-1.8
2,689,629	-		IAI47_12765	0.37	-2.1
2,689,634	+		IAI47_12765	0.37	-1.3
2,689,634	+		IAI47_12765	0.37	+0.2
2,689,634	+		IAI47_12765	0.37	-0.8
2,689,634	+		IAI47_12765	0.37	+0.2
2,689,635	-		IAI47_12765	0.37	-1.4
2,689,635	-		IAI47_12765	0.37	+0.6
2,689,637	+		IAI47_12765	0.38	-0.5
2,689,637	+		IAI47_12765	0.38	-1.5
2,689,637	+		IAI47_12765	0.38	-0.5
2,689,637	+		IAI47_12765	0.38	-0.0
2,689,637	+		IAI47_12765	0.38	-0.7
2,689,637	+		IAI47_12765	0.38	+0.5
2,689,638	-		IAI47_12765	0.38	-1.0
2,689,638	-		IAI47_12765	0.38	-1.3
2,689,638	-		IAI47_12765	0.38	-0.4
2,689,654	+		IAI47_12765	0.39	-0.1
2,689,654	+		IAI47_12765	0.39	-0.4
2,689,655	-		IAI47_12765	0.39	-0.4
2,689,829	+		IAI47_12765	0.54	+0.0
2,689,919	+		IAI47_12765	0.61	+0.8
2,689,919	+		IAI47_12765	0.61	+0.9
2,689,919	+		IAI47_12765	0.61	-0.7
2,689,920	-		IAI47_12765	0.61	-1.1
2,689,920	-		IAI47_12765	0.61	-0.9
2,689,940	+		IAI47_12765	0.63	+0.5
2,689,940	+		IAI47_12765	0.63	-0.4
2,689,940	+		IAI47_12765	0.63	-0.9
2,689,940	+		IAI47_12765	0.63	+1.4
2,689,941	-		IAI47_12765	0.63	-0.0
2,689,941	-		IAI47_12765	0.63	-1.4
2,689,941	-		IAI47_12765	0.63	-0.8
2,689,941	-		IAI47_12765	0.63	-2.4
2,689,942	+		IAI47_12765	0.63	+1.0
2,689,943	-		IAI47_12765	0.63	-2.1
2,689,943	-		IAI47_12765	0.63	-1.1
2,689,996	+		IAI47_12765	0.68	-0.3
2,689,996	+		IAI47_12765	0.68	-0.2
2,689,996	+		IAI47_12765	0.68	-0.9
2,690,018	+		IAI47_12765	0.70	+0.8
2,690,018	+		IAI47_12765	0.70	-1.7
2,690,019	-		IAI47_12765	0.70	+0.4
2,690,019	-		IAI47_12765	0.70	-0.8
2,690,019	-		IAI47_12765	0.70	+0.3
2,690,019	-		IAI47_12765	0.70	+0.1
2,690,032	+		IAI47_12765	0.71	-1.0
2,690,036	+		IAI47_12765	0.71	+2.6
2,690,036	+		IAI47_12765	0.71	-0.1
2,690,036	+		IAI47_12765	0.71	-0.6
2,690,037	-		IAI47_12765	0.71	-0.6
2,690,077	+		IAI47_12765	0.74	+0.3
2,690,078	-		IAI47_12765	0.75	-1.3
2,690,092	+		IAI47_12765	0.76	+0.7
2,690,092	+		IAI47_12765	0.76	+0.8
2,690,092	+		IAI47_12765	0.76	-1.6
2,690,093	-		IAI47_12765	0.76	-0.7
2,690,128	+		IAI47_12765	0.79	+0.8
2,690,129	-		IAI47_12765	0.79	-0.4
2,690,129	-		IAI47_12765	0.79	-1.1
2,690,209	+		IAI47_12765	0.86	+2.4
2,690,210	-		IAI47_12765	0.86	-0.6
2,690,210	-		IAI47_12765	0.86	-1.3
2,690,212	+		IAI47_12765	0.86	-1.3
2,690,212	+		IAI47_12765	0.86	+0.6
2,690,212	+		IAI47_12765	0.86	-0.6
2,690,212	+		IAI47_12765	0.86	-0.6
2,690,213	-		IAI47_12765	0.86	-0.2
2,690,215	+		IAI47_12765	0.86	+0.7
2,690,215	+		IAI47_12765	0.86	-0.1
2,690,227	+		IAI47_12765	0.87	+0.1
2,690,227	+		IAI47_12765	0.87	-2.5
2,690,262	+				-0.1
2,690,262	+				+0.6
2,690,262	+				-1.3
2,690,263	-				+1.1
2,690,263	-				-0.4
2,690,291	+				-2.4
2,690,292	-				-2.8
2,690,292	-				+0.3
2,690,292	-				-0.6
2,690,300	-				+0.6
2,690,300	-				-1.2
2,690,300	-				+0.7
2,690,341	+				+0.5
2,690,341	+				-0.4
2,690,341	+				+0.9
2,690,341	+				+0.1
2,690,341	+				+1.1
2,690,342	-				+0.4
2,690,342	-				-1.1
2,690,342	-				-0.2
2,690,342	-				-0.5
2,690,342	-				-0.4
2,690,342	-				-0.4
2,690,342	-				+0.6
2,690,342	-				-1.2
2,690,342	-				-1.9
2,690,342	-				-1.2
2,690,378	+				+0.4
2,690,378	+				+1.4
2,690,379	-				-1.2
2,690,379	-				-1.1
2,690,379	-				-0.2
2,690,422	+				+0.3
2,690,422	+				-1.3
2,690,463	+				+0.8
2,690,464	-				-0.3
2,690,487	+				-0.0
2,690,487	+				-0.6
2,690,487	+				-0.3
2,690,539	+		IAI47_12770	0.15	-1.5
2,690,554	-		IAI47_12770	0.17	-0.6
2,690,554	-		IAI47_12770	0.17	-0.6
2,690,562	+		IAI47_12770	0.18	+0.3
2,690,562	+		IAI47_12770	0.18	-0.6
2,690,562	+		IAI47_12770	0.18	+2.4
2,690,562	+		IAI47_12770	0.18	-0.6
2,690,562	+		IAI47_12770	0.18	-0.9
2,690,562	+		IAI47_12770	0.18	-0.1
2,690,562	+		IAI47_12770	0.18	-0.5
2,690,562	+		IAI47_12770	0.18	-0.9
2,690,562	+		IAI47_12770	0.18	-0.8
2,690,563	-		IAI47_12770	0.19	-0.7
2,690,563	-		IAI47_12770	0.19	-1.4
2,690,563	-		IAI47_12770	0.19	+0.2
2,690,563	-		IAI47_12770	0.19	+0.3
2,690,563	-		IAI47_12770	0.19	-2.9
2,690,614	-		IAI47_12770	0.27	-0.8
2,690,620	-		IAI47_12770	0.28	-1.8
2,690,719	+		IAI47_12770	0.43	-0.7
2,690,719	+		IAI47_12770	0.43	+0.4
2,690,719	+		IAI47_12770	0.43	-1.5
2,690,720	-		IAI47_12770	0.43	-1.7
2,690,720	-		IAI47_12770	0.43	-0.7
2,690,934	+		IAI47_12770	0.77	-1.3
2,690,935	-		IAI47_12770	0.78	+0.4
2,690,935	-		IAI47_12770	0.78	-0.3
2,691,060	+				-1.1
2,691,060	+				+0.6
2,691,060	+				-0.1
2,691,061	-				-0.1
2,691,061	-				+0.2
2,691,061	-				-0.3
2,691,061	-				+0.3
2,691,116	+				-1.7
2,691,117	-				-0.1
2,691,144	+				+1.6
2,691,144	+				-1.8
2,691,144	+				-0.3
2,691,144	+				-1.0
2,691,144	+				+0.4
2,691,144	+				-0.8
2,691,144	+				+1.3
2,691,144	+				-1.4
2,691,144	+				-1.4
2,691,144	+				-1.3
2,691,144	+				-1.1
2,691,145	-				+0.1
2,691,145	-				-0.6
2,691,145	-				-0.7
2,691,145	-				+0.1
2,691,145	-				+0.1
2,691,145	-				+0.6
2,691,148	+				-1.7
2,691,148	+				-0.7
2,691,148	+				-1.8
2,691,148	+				-0.8
2,691,149	-				-1.4
2,691,149	-				+1.7
2,691,149	-				+0.3
2,691,149	-				+2.8
2,691,149	-				+1.1
2,691,149	-				-0.5
2,691,157	-				+0.1
2,691,168	-				+0.4
2,691,170	+		IAI47_12775	0.10	-0.9
2,691,171	-		IAI47_12775	0.10	+0.2
2,691,171	-		IAI47_12775	0.10	-0.5
2,691,171	-		IAI47_12775	0.10	+0.1
2,691,175	+		IAI47_12775	0.11	+0.3
2,691,175	+		IAI47_12775	0.11	+0.1
2,691,176	-		IAI47_12775	0.11	-0.1
2,691,176	-		IAI47_12775	0.11	-1.6
2,691,176	-		IAI47_12775	0.11	-0.3
2,691,197	-		IAI47_12775	0.15	+0.1
2,691,212	-		IAI47_12775	0.18	+0.4
2,691,238	-		IAI47_12775	0.22	-0.6
2,691,269	+		IAI47_12775	0.28	-1.0
2,691,269	+		IAI47_12775	0.28	+0.5
2,691,269	+		IAI47_12775	0.28	+0.1
2,691,269	+		IAI47_12775	0.28	-0.9
2,691,269	+		IAI47_12775	0.28	-1.9
2,691,269	+		IAI47_12775	0.28	-2.8
2,691,270	-		IAI47_12775	0.28	-0.1
2,691,270	-		IAI47_12775	0.28	+0.2
2,691,270	-		IAI47_12775	0.28	-0.4
2,691,270	-		IAI47_12775	0.28	-0.6
2,691,270	-		IAI47_12775	0.28	-0.1
2,691,270	-		IAI47_12775	0.28	-0.4
2,691,304	+		IAI47_12775	0.34	-1.1
2,691,304	+		IAI47_12775	0.34	-0.5
2,691,305	-		IAI47_12775	0.35	-0.9
2,691,305	-		IAI47_12775	0.35	-0.4
2,691,305	-		IAI47_12775	0.35	-0.3
2,691,305	-		IAI47_12775	0.35	+1.3
2,691,305	-		IAI47_12775	0.35	+0.1
2,691,305	-		IAI47_12775	0.35	+1.0
2,691,305	-		IAI47_12775	0.35	+0.4
2,691,333	-		IAI47_12775	0.40	+0.8
2,691,358	-		IAI47_12775	0.44	+0.6
2,691,363	+		IAI47_12775	0.45	-1.9
2,691,364	-		IAI47_12775	0.45	-0.4
2,691,364	-		IAI47_12775	0.45	-0.8
2,691,426	+		IAI47_12775	0.57	-1.5
2,691,426	+		IAI47_12775	0.57	-0.1
2,691,427	-		IAI47_12775	0.57	+0.4
2,691,438	-		IAI47_12775	0.59	+0.1
2,691,458	-		IAI47_12775	0.62	+0.6
2,691,482	+		IAI47_12775	0.67	-0.1
2,691,482	+		IAI47_12775	0.67	-1.0
2,691,483	-		IAI47_12775	0.67	+1.2
2,691,490	-		IAI47_12775	0.68	+2.7
2,691,490	-		IAI47_12775	0.68	+1.9
2,691,510	+		IAI47_12775	0.72	-0.4
2,691,511	-		IAI47_12775	0.72	-1.5
2,691,511	-		IAI47_12775	0.72	+1.2
2,691,534	+		IAI47_12775	0.76	-0.9
2,691,535	-		IAI47_12775	0.77	-0.0
2,691,535	-		IAI47_12775	0.77	-0.1
2,691,537	+		IAI47_12775	0.77	+0.1
2,691,537	+		IAI47_12775	0.77	+0.1
2,691,537	+		IAI47_12775	0.77	+0.9
2,691,537	+		IAI47_12775	0.77	-0.7
2,691,537	+		IAI47_12775	0.77	-0.8
2,691,537	+		IAI47_12775	0.77	+0.9
2,691,538	-		IAI47_12775	0.77	+0.6
2,691,538	-		IAI47_12775	0.77	+0.1
2,691,538	-		IAI47_12775	0.77	+0.4
2,691,547	+		IAI47_12775	0.79	-1.8
2,691,547	+		IAI47_12775	0.79	-0.3
2,691,547	+		IAI47_12775	0.79	-0.7
2,691,547	+		IAI47_12775	0.79	-0.8
2,691,564	+		IAI47_12775	0.82	+1.7
2,691,564	+		IAI47_12775	0.82	+1.1
2,691,564	+		IAI47_12775	0.82	+0.5
2,691,564	+		IAI47_12775	0.82	-0.8
2,691,564	+		IAI47_12775	0.82	-0.3
2,691,565	-		IAI47_12775	0.82	-0.0
2,691,565	-		IAI47_12775	0.82	-0.9
2,691,565	-		IAI47_12775	0.82	-0.4
2,691,595	+		IAI47_12775	0.87	-0.7
2,691,596	-		IAI47_12775	0.88	+0.2
2,691,618	+				-1.2
2,691,619	-				+0.2
2,691,631	+				-0.3
2,691,632	-				-0.0
2,691,632	-				+0.3
2,691,632	-				+0.5
2,691,632	-				+0.8
2,691,632	-				-0.8
2,691,654	+				+0.6
2,691,654	+				-0.6
2,691,654	+				+0.1
2,691,655	-				+0.6
2,691,655	-				-0.7
2,691,657	+				-1.2
2,691,657	+				-0.7
2,691,657	+				-0.4
2,691,657	+				-0.1
2,691,657	+				+1.7
2,691,657	+				-0.3
2,691,657	+				+0.1
2,691,658	-				+0.2
2,691,658	-				+0.6
2,691,665	+				-0.0
2,691,665	+				-0.7
2,691,665	+				-1.3
2,691,666	-				-0.9
2,691,666	-				-0.4
2,691,666	-				-1.9
2,691,666	-				+0.0
2,691,724	+				-0.7
2,691,725	-				-1.7
2,691,725	-				-0.7
2,691,803	-				-1.9
2,691,803	-				-0.9
2,691,803	-				-0.1
2,691,810	+				+2.2
2,691,810	+				-1.1
2,691,811	-				+1.6
2,691,830	-				+0.8
2,691,837	+				-0.9
2,691,850	+				-0.7
2,691,850	+				+0.6
2,691,850	+				+0.4
2,691,850	+				-1.1
2,691,859	-				+0.4
2,691,909	-				+1.5
2,691,910	+				-0.3
2,691,911	-				+0.5
2,691,911	-				+0.5
2,691,911	-				+0.1
2,691,911	-				+2.6
2,691,916	+				-1.0
2,691,920	+				-0.9
2,691,920	+				+0.8
2,691,921	-				+0.1
2,691,921	-				+0.3
2,691,921	-				-0.2
2,691,921	-				+1.4
2,691,965	+				-0.4
2,691,966	-				+0.8
2,691,970	+				-0.1
2,691,970	+				-1.4
2,691,970	+				+1.0
2,691,971	-				-1.7
2,691,971	-				-1.5
2,691,971	-				+0.0
2,691,973	+				-0.8
2,691,973	+				-1.3
2,691,973	+				-0.6
2,691,974	-				-1.5
2,691,974	-				+0.5
2,691,974	-				+1.4
2,691,974	-				-0.8
2,692,009	+				+0.7
2,692,009	+				+0.1
2,692,009	+				-1.2
2,692,009	+				-0.5
2,692,029	+				-1.0
2,692,030	-				+0.8
2,692,030	-				-0.5
2,692,044	-		IAI47_12780	0.11	-1.4
2,692,074	+		IAI47_12780	0.12	-1.9
2,692,075	-		IAI47_12780	0.12	-0.1
2,692,075	-		IAI47_12780	0.12	+0.5