Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06563 and H281DRAFT_06564 are separated by 136 nucleotides H281DRAFT_06564 and H281DRAFT_06565 are separated by 624 nucleotides H281DRAFT_06565 and H281DRAFT_06566 are separated by 259 nucleotides
H281DRAFT_06563: H281DRAFT_06563 - hypothetical protein, at 3,583 to 3,846
_06563
H281DRAFT_06564: H281DRAFT_06564 - hypothetical protein, at 3,983 to 4,183
_06564
H281DRAFT_06565: H281DRAFT_06565 - filamentous hemagglutinin family N-terminal domain-containing protein, at 4,808 to 7,060
_06565
H281DRAFT_06566: H281DRAFT_06566 - hypothetical protein, at 7,320 to 7,823
_06566
Position (kb) 4
5
6
7
8 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 3.873 kb on + strand at 3.873 kb on + strand at 3.874 kb on - strand at 3.940 kb on - strand at 3.971 kb on + strand at 4.044 kb on - strand, within H281DRAFT_06564 at 4.044 kb on - strand, within H281DRAFT_06564 at 4.117 kb on + strand, within H281DRAFT_06564 at 4.117 kb on + strand, within H281DRAFT_06564 at 4.118 kb on - strand, within H281DRAFT_06564 at 4.118 kb on - strand, within H281DRAFT_06564 at 4.118 kb on - strand, within H281DRAFT_06564 at 4.181 kb on + strand at 4.182 kb on - strand at 4.227 kb on + strand at 4.227 kb on + strand at 4.227 kb on + strand at 4.228 kb on - strand at 4.228 kb on - strand at 4.290 kb on + strand at 4.290 kb on + strand at 4.291 kb on - strand at 4.292 kb on + strand at 4.292 kb on + strand at 4.292 kb on + strand at 4.293 kb on - strand at 4.293 kb on - strand at 4.293 kb on - strand at 4.295 kb on + strand at 4.296 kb on - strand at 4.346 kb on + strand at 4.346 kb on + strand at 4.346 kb on + strand at 4.347 kb on - strand at 4.445 kb on + strand at 4.445 kb on + strand at 4.446 kb on - strand at 4.446 kb on - strand at 4.531 kb on + strand at 4.532 kb on - strand at 4.608 kb on + strand at 4.608 kb on + strand at 4.609 kb on - strand at 4.634 kb on - strand at 4.778 kb on - strand at 4.992 kb on + strand at 4.993 kb on - strand at 5.020 kb on - strand at 5.163 kb on + strand, within H281DRAFT_06565 at 5.164 kb on - strand, within H281DRAFT_06565 at 5.164 kb on - strand, within H281DRAFT_06565 at 5.164 kb on - strand, within H281DRAFT_06565 at 5.164 kb on - strand, within H281DRAFT_06565 at 5.262 kb on + strand, within H281DRAFT_06565 at 5.310 kb on + strand, within H281DRAFT_06565 at 5.323 kb on - strand, within H281DRAFT_06565 at 5.338 kb on + strand, within H281DRAFT_06565 at 5.356 kb on - strand, within H281DRAFT_06565 at 5.388 kb on + strand, within H281DRAFT_06565 at 5.389 kb on - strand, within H281DRAFT_06565 at 5.400 kb on + strand, within H281DRAFT_06565 at 5.401 kb on - strand, within H281DRAFT_06565 at 5.488 kb on + strand, within H281DRAFT_06565 at 5.604 kb on - strand, within H281DRAFT_06565 at 5.695 kb on - strand, within H281DRAFT_06565 at 5.743 kb on - strand, within H281DRAFT_06565 at 6.203 kb on - strand, within H281DRAFT_06565 at 6.203 kb on - strand, within H281DRAFT_06565 at 6.686 kb on + strand, within H281DRAFT_06565 at 6.709 kb on - strand, within H281DRAFT_06565 at 6.921 kb on + strand at 6.921 kb on + strand at 7.006 kb on + strand at 7.006 kb on + strand at 7.006 kb on + strand at 7.006 kb on + strand at 7.006 kb on + strand at 7.006 kb on + strand at 7.007 kb on - strand at 7.007 kb on - strand at 7.007 kb on - strand at 7.007 kb on - strand at 7.010 kb on + strand at 7.049 kb on - strand at 7.140 kb on + strand at 7.153 kb on + strand at 7.157 kb on + strand at 7.157 kb on + strand at 7.261 kb on + strand at 7.307 kb on + strand at 7.307 kb on + strand at 7.331 kb on - strand at 7.473 kb on + strand, within H281DRAFT_06566 at 7.531 kb on + strand, within H281DRAFT_06566 at 7.531 kb on + strand, within H281DRAFT_06566 at 7.531 kb on + strand, within H281DRAFT_06566 at 7.532 kb on - strand, within H281DRAFT_06566 at 7.532 kb on - strand, within H281DRAFT_06566 at 7.575 kb on - strand, within H281DRAFT_06566 at 7.575 kb on - strand, within H281DRAFT_06566 at 7.579 kb on + strand, within H281DRAFT_06566 at 7.647 kb on + strand, within H281DRAFT_06566 at 7.706 kb on + strand, within H281DRAFT_06566 at 7.706 kb on + strand, within H281DRAFT_06566 at 7.706 kb on + strand, within H281DRAFT_06566 at 7.706 kb on + strand, within H281DRAFT_06566 at 7.706 kb on + strand, within H281DRAFT_06566 at 7.707 kb on - strand, within H281DRAFT_06566 at 7.710 kb on + strand, within H281DRAFT_06566 at 7.710 kb on + strand, within H281DRAFT_06566 at 7.729 kb on + strand, within H281DRAFT_06566 at 7.729 kb on + strand, within H281DRAFT_06566 at 7.730 kb on - strand, within H281DRAFT_06566 at 7.730 kb on - strand, within H281DRAFT_06566 at 7.767 kb on - strand, within H281DRAFT_06566 at 7.864 kb on + strand at 7.865 kb on - strand at 7.873 kb on - strand at 8.031 kb on + strand at 8.031 kb on + strand at 8.032 kb on - strand at 8.032 kb on - strand at 8.032 kb on - strand at 8.045 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,873 + -0.0 3,873 + +1.1 3,874 - -0.1 3,940 - -1.5 3,971 + +0.4 4,044 - H281DRAFT_06564 0.30 -1.1 4,044 - H281DRAFT_06564 0.30 +1.0 4,117 + H281DRAFT_06564 0.67 -0.4 4,117 + H281DRAFT_06564 0.67 -0.4 4,118 - H281DRAFT_06564 0.67 -0.6 4,118 - H281DRAFT_06564 0.67 +0.2 4,118 - H281DRAFT_06564 0.67 +1.2 4,181 + +0.5 4,182 - +0.2 4,227 + +0.5 4,227 + +0.2 4,227 + -0.6 4,228 - +0.5 4,228 - +1.7 4,290 + -3.0 4,290 + +0.1 4,291 - -0.0 4,292 + -0.5 4,292 + -1.3 4,292 + -0.8 4,293 - -0.5 4,293 - -0.5 4,293 - +0.2 4,295 + +0.0 4,296 - -0.3 4,346 + -0.9 4,346 + -1.3 4,346 + +0.1 4,347 - +0.3 4,445 + -0.7 4,445 + -0.2 4,446 - +0.5 4,446 - +0.3 4,531 + +0.2 4,532 - +0.3 4,608 + -0.4 4,608 + +0.8 4,609 - +0.5 4,634 - +0.3 4,778 - -1.5 4,992 + -0.6 4,993 - +0.4 5,020 - +0.5 5,163 + H281DRAFT_06565 0.16 +0.6 5,164 - H281DRAFT_06565 0.16 -0.2 5,164 - H281DRAFT_06565 0.16 +0.2 5,164 - H281DRAFT_06565 0.16 -0.2 5,164 - H281DRAFT_06565 0.16 +0.1 5,262 + H281DRAFT_06565 0.20 -0.1 5,310 + H281DRAFT_06565 0.22 +0.2 5,323 - H281DRAFT_06565 0.23 -0.4 5,338 + H281DRAFT_06565 0.24 +0.3 5,356 - H281DRAFT_06565 0.24 +0.9 5,388 + H281DRAFT_06565 0.26 -0.7 5,389 - H281DRAFT_06565 0.26 -0.3 5,400 + H281DRAFT_06565 0.26 +0.7 5,401 - H281DRAFT_06565 0.26 +0.4 5,488 + H281DRAFT_06565 0.30 -0.0 5,604 - H281DRAFT_06565 0.35 -0.6 5,695 - H281DRAFT_06565 0.39 -0.4 5,743 - H281DRAFT_06565 0.42 +1.1 6,203 - H281DRAFT_06565 0.62 -0.1 6,203 - H281DRAFT_06565 0.62 +0.4 6,686 + H281DRAFT_06565 0.83 -0.2 6,709 - H281DRAFT_06565 0.84 +0.2 6,921 + -0.3 6,921 + +0.3 7,006 + +0.5 7,006 + +0.5 7,006 + +1.3 7,006 + -1.5 7,006 + +1.2 7,006 + +0.3 7,007 - -0.3 7,007 - -0.3 7,007 - +0.5 7,007 - -0.3 7,010 + +0.2 7,049 - +0.8 7,140 + +3.7 7,153 + +0.1 7,157 + +0.2 7,157 + +0.4 7,261 + -0.2 7,307 + +0.1 7,307 + +0.7 7,331 - +1.1 7,473 + H281DRAFT_06566 0.30 -0.7 7,531 + H281DRAFT_06566 0.42 +0.1 7,531 + H281DRAFT_06566 0.42 +1.1 7,531 + H281DRAFT_06566 0.42 -0.3 7,532 - H281DRAFT_06566 0.42 -0.6 7,532 - H281DRAFT_06566 0.42 +0.1 7,575 - H281DRAFT_06566 0.51 -0.2 7,575 - H281DRAFT_06566 0.51 -1.3 7,579 + H281DRAFT_06566 0.51 -0.4 7,647 + H281DRAFT_06566 0.65 +0.1 7,706 + H281DRAFT_06566 0.77 +0.2 7,706 + H281DRAFT_06566 0.77 -0.2 7,706 + H281DRAFT_06566 0.77 +1.5 7,706 + H281DRAFT_06566 0.77 +1.1 7,706 + H281DRAFT_06566 0.77 +0.4 7,707 - H281DRAFT_06566 0.77 +0.5 7,710 + H281DRAFT_06566 0.77 +0.4 7,710 + H281DRAFT_06566 0.77 -0.1 7,729 + H281DRAFT_06566 0.81 +1.9 7,729 + H281DRAFT_06566 0.81 -0.6 7,730 - H281DRAFT_06566 0.81 +0.9 7,730 - H281DRAFT_06566 0.81 -1.9 7,767 - H281DRAFT_06566 0.89 -0.7 7,864 + +0.8 7,865 - -0.1 7,873 - -0.9 8,031 + +0.2 8,031 + +0.6 8,032 - -0.7 8,032 - +0.1 8,032 - +0.5 8,045 + +0.2
Or see this region's nucleotide sequence