Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04543 and H281DRAFT_04544 are separated by 257 nucleotides H281DRAFT_04544 and H281DRAFT_04545 overlap by 4 nucleotides H281DRAFT_04545 and H281DRAFT_04546 are separated by 43 nucleotides
H281DRAFT_04543: H281DRAFT_04543 - transcriptional regulator, TetR family, at 275,978 to 276,691
_04543
H281DRAFT_04544: H281DRAFT_04544 - diacylglycerol kinase (ATP), at 276,949 to 277,620
_04544
H281DRAFT_04545: H281DRAFT_04545 - Glycosyltransferase involved in cell wall bisynthesis, at 277,617 to 278,648
_04545
H281DRAFT_04546: H281DRAFT_04546 - UDP-2,3-diacylglucosamine pyrophosphatase LpxH, at 278,692 to 279,633
_04546
Position (kb) 277
278
279 Strain fitness (log2 ratio) -2
-1
0
1 at 276.748 kb on - strand at 276.769 kb on + strand at 276.792 kb on - strand at 276.807 kb on + strand at 276.810 kb on + strand at 277.335 kb on - strand, within H281DRAFT_04544 at 277.335 kb on - strand, within H281DRAFT_04544 at 277.583 kb on + strand at 277.583 kb on + strand at 277.583 kb on + strand at 277.583 kb on + strand at 277.583 kb on + strand at 277.583 kb on + strand at 277.584 kb on - strand at 277.643 kb on - strand at 277.931 kb on - strand, within H281DRAFT_04545 at 277.931 kb on - strand, within H281DRAFT_04545 at 277.969 kb on + strand, within H281DRAFT_04545 at 277.969 kb on + strand, within H281DRAFT_04545 at 277.970 kb on - strand, within H281DRAFT_04545 at 277.970 kb on - strand, within H281DRAFT_04545 at 278.094 kb on + strand, within H281DRAFT_04545 at 278.094 kb on + strand, within H281DRAFT_04545 at 278.095 kb on - strand, within H281DRAFT_04545 at 278.098 kb on + strand, within H281DRAFT_04545 at 278.192 kb on + strand, within H281DRAFT_04545 at 278.258 kb on + strand, within H281DRAFT_04545 at 278.281 kb on + strand, within H281DRAFT_04545 at 278.281 kb on + strand, within H281DRAFT_04545 at 278.281 kb on + strand, within H281DRAFT_04545 at 278.282 kb on - strand, within H281DRAFT_04545 at 278.359 kb on - strand, within H281DRAFT_04545 at 278.694 kb on - strand at 278.750 kb on + strand at 278.750 kb on + strand at 278.751 kb on - strand at 278.775 kb on - strand at 278.826 kb on - strand, within H281DRAFT_04546 at 278.973 kb on - strand, within H281DRAFT_04546 at 278.973 kb on - strand at 278.973 kb on - strand, within H281DRAFT_04546 at 279.053 kb on + strand, within H281DRAFT_04546 at 279.053 kb on + strand, within H281DRAFT_04546 at 279.239 kb on + strand, within H281DRAFT_04546 at 279.239 kb on + strand, within H281DRAFT_04546 at 279.239 kb on + strand, within H281DRAFT_04546 at 279.239 kb on + strand, within H281DRAFT_04546 at 279.239 kb on + strand, within H281DRAFT_04546 at 279.240 kb on - strand, within H281DRAFT_04546 at 279.244 kb on + strand, within H281DRAFT_04546 at 279.244 kb on + strand, within H281DRAFT_04546 at 279.244 kb on + strand, within H281DRAFT_04546 at 279.244 kb on + strand, within H281DRAFT_04546 at 279.244 kb on + strand, within H281DRAFT_04546 at 279.245 kb on - strand, within H281DRAFT_04546 at 279.312 kb on - strand, within H281DRAFT_04546 at 279.312 kb on - strand, within H281DRAFT_04546 at 279.359 kb on + strand, within H281DRAFT_04546 at 279.359 kb on + strand, within H281DRAFT_04546 at 279.360 kb on - strand, within H281DRAFT_04546 at 279.360 kb on - strand, within H281DRAFT_04546 at 279.365 kb on + strand, within H281DRAFT_04546 at 279.365 kb on + strand, within H281DRAFT_04546 at 279.365 kb on + strand, within H281DRAFT_04546 at 279.366 kb on - strand, within H281DRAFT_04546 at 279.366 kb on - strand, within H281DRAFT_04546 at 279.366 kb on - strand, within H281DRAFT_04546 at 279.401 kb on + strand, within H281DRAFT_04546 at 279.401 kb on + strand, within H281DRAFT_04546 at 279.401 kb on + strand, within H281DRAFT_04546 at 279.402 kb on - strand, within H281DRAFT_04546
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 276,748 - +0.2 276,769 + -1.6 276,792 - -1.7 276,807 + +0.0 276,810 + +0.1 277,335 - H281DRAFT_04544 0.57 -0.5 277,335 - H281DRAFT_04544 0.57 +0.2 277,583 + +1.1 277,583 + +1.4 277,583 + -1.3 277,583 + +0.4 277,583 + +0.8 277,583 + +0.1 277,584 - +0.3 277,643 - +0.2 277,931 - H281DRAFT_04545 0.30 +0.3 277,931 - H281DRAFT_04545 0.30 +0.5 277,969 + H281DRAFT_04545 0.34 +0.1 277,969 + H281DRAFT_04545 0.34 -0.4 277,970 - H281DRAFT_04545 0.34 +1.7 277,970 - H281DRAFT_04545 0.34 -0.4 278,094 + H281DRAFT_04545 0.46 -0.2 278,094 + H281DRAFT_04545 0.46 +0.4 278,095 - H281DRAFT_04545 0.46 -0.2 278,098 + H281DRAFT_04545 0.47 +0.3 278,192 + H281DRAFT_04545 0.56 +0.3 278,258 + H281DRAFT_04545 0.62 +0.8 278,281 + H281DRAFT_04545 0.64 -0.2 278,281 + H281DRAFT_04545 0.64 +0.0 278,281 + H281DRAFT_04545 0.64 +0.8 278,282 - H281DRAFT_04545 0.64 +0.6 278,359 - H281DRAFT_04545 0.72 -0.2 278,694 - -0.3 278,750 + +0.5 278,750 + +0.1 278,751 - +0.2 278,775 - -0.3 278,826 - H281DRAFT_04546 0.14 +0.4 278,973 - H281DRAFT_04546 0.30 -0.2 278,973 - -1.2 278,973 - H281DRAFT_04546 0.30 +0.3 279,053 + H281DRAFT_04546 0.38 -0.3 279,053 + H281DRAFT_04546 0.38 +0.1 279,239 + H281DRAFT_04546 0.58 -1.0 279,239 + H281DRAFT_04546 0.58 +0.3 279,239 + H281DRAFT_04546 0.58 -0.3 279,239 + H281DRAFT_04546 0.58 -0.2 279,239 + H281DRAFT_04546 0.58 -0.1 279,240 - H281DRAFT_04546 0.58 +0.5 279,244 + H281DRAFT_04546 0.59 -0.5 279,244 + H281DRAFT_04546 0.59 +0.7 279,244 + H281DRAFT_04546 0.59 +0.5 279,244 + H281DRAFT_04546 0.59 -0.9 279,244 + H281DRAFT_04546 0.59 +0.4 279,245 - H281DRAFT_04546 0.59 -1.1 279,312 - H281DRAFT_04546 0.66 -0.0 279,312 - H281DRAFT_04546 0.66 -0.2 279,359 + H281DRAFT_04546 0.71 +0.7 279,359 + H281DRAFT_04546 0.71 +0.7 279,360 - H281DRAFT_04546 0.71 +0.2 279,360 - H281DRAFT_04546 0.71 +0.5 279,365 + H281DRAFT_04546 0.71 +0.7 279,365 + H281DRAFT_04546 0.71 -0.8 279,365 + H281DRAFT_04546 0.71 +0.1 279,366 - H281DRAFT_04546 0.72 +0.1 279,366 - H281DRAFT_04546 0.72 +0.3 279,366 - H281DRAFT_04546 0.72 +0.6 279,401 + H281DRAFT_04546 0.75 +0.0 279,401 + H281DRAFT_04546 0.75 -2.2 279,401 + H281DRAFT_04546 0.75 +0.6 279,402 - H281DRAFT_04546 0.75 -0.3
Or see this region's nucleotide sequence