Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04176 and H281DRAFT_04177 are separated by 128 nucleotides H281DRAFT_04177 and H281DRAFT_04178 are separated by 256 nucleotides H281DRAFT_04178 and H281DRAFT_04179 are separated by 141 nucleotides
H281DRAFT_04176: H281DRAFT_04176 - Uncharacterized conserved protein, DUF427 family, at 293,023 to 293,415
_04176
H281DRAFT_04177: H281DRAFT_04177 - hypothetical protein, at 293,544 to 294,041
_04177
H281DRAFT_04178: H281DRAFT_04178 - serine protease Do, at 294,298 to 295,818
_04178
H281DRAFT_04179: H281DRAFT_04179 - two-component system, OmpR family, sensor kinase, at 295,960 to 297,261
_04179
Position (kb) 294
295
296 Strain fitness (log2 ratio) -2
-1
0
1 at 293.355 kb on + strand, within H281DRAFT_04176 at 293.355 kb on + strand, within H281DRAFT_04176 at 293.356 kb on - strand, within H281DRAFT_04176 at 293.448 kb on + strand at 293.626 kb on + strand, within H281DRAFT_04177 at 293.645 kb on - strand, within H281DRAFT_04177 at 293.674 kb on + strand, within H281DRAFT_04177 at 293.675 kb on - strand, within H281DRAFT_04177 at 293.675 kb on - strand, within H281DRAFT_04177 at 293.711 kb on + strand, within H281DRAFT_04177 at 293.749 kb on + strand, within H281DRAFT_04177 at 293.749 kb on + strand, within H281DRAFT_04177 at 293.749 kb on + strand, within H281DRAFT_04177 at 293.750 kb on - strand, within H281DRAFT_04177 at 293.768 kb on + strand, within H281DRAFT_04177 at 294.054 kb on + strand at 294.361 kb on - strand at 294.361 kb on - strand at 294.998 kb on + strand, within H281DRAFT_04178 at 295.100 kb on + strand, within H281DRAFT_04178 at 295.156 kb on - strand, within H281DRAFT_04178 at 295.381 kb on - strand, within H281DRAFT_04178 at 295.382 kb on + strand, within H281DRAFT_04178 at 295.383 kb on - strand, within H281DRAFT_04178 at 295.383 kb on - strand, within H281DRAFT_04178 at 295.383 kb on - strand, within H281DRAFT_04178 at 295.401 kb on + strand, within H281DRAFT_04178 at 295.401 kb on + strand, within H281DRAFT_04178 at 295.401 kb on + strand, within H281DRAFT_04178 at 295.493 kb on + strand, within H281DRAFT_04178 at 295.493 kb on + strand, within H281DRAFT_04178 at 295.494 kb on - strand, within H281DRAFT_04178 at 295.494 kb on - strand, within H281DRAFT_04178 at 295.502 kb on + strand, within H281DRAFT_04178 at 295.503 kb on - strand, within H281DRAFT_04178 at 295.823 kb on + strand at 295.888 kb on + strand at 295.888 kb on + strand at 295.888 kb on + strand at 295.889 kb on - strand at 295.974 kb on + strand at 295.975 kb on - strand at 296.017 kb on - strand at 296.083 kb on - strand at 296.240 kb on + strand, within H281DRAFT_04179 at 296.240 kb on + strand, within H281DRAFT_04179 at 296.241 kb on - strand, within H281DRAFT_04179 at 296.241 kb on - strand, within H281DRAFT_04179 at 296.367 kb on - strand, within H281DRAFT_04179
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 293,355 + H281DRAFT_04176 0.84 +0.3 293,355 + H281DRAFT_04176 0.84 +0.5 293,356 - H281DRAFT_04176 0.85 -0.4 293,448 + -1.1 293,626 + H281DRAFT_04177 0.16 -0.8 293,645 - H281DRAFT_04177 0.20 -0.4 293,674 + H281DRAFT_04177 0.26 -0.7 293,675 - H281DRAFT_04177 0.26 +0.1 293,675 - H281DRAFT_04177 0.26 -0.2 293,711 + H281DRAFT_04177 0.34 -2.4 293,749 + H281DRAFT_04177 0.41 -0.0 293,749 + H281DRAFT_04177 0.41 -0.4 293,749 + H281DRAFT_04177 0.41 +1.0 293,750 - H281DRAFT_04177 0.41 +0.2 293,768 + H281DRAFT_04177 0.45 -2.6 294,054 + -0.5 294,361 - -0.5 294,361 - +0.4 294,998 + H281DRAFT_04178 0.46 -2.4 295,100 + H281DRAFT_04178 0.53 -0.3 295,156 - H281DRAFT_04178 0.56 -0.2 295,381 - H281DRAFT_04178 0.71 -0.4 295,382 + H281DRAFT_04178 0.71 -1.0 295,383 - H281DRAFT_04178 0.71 -1.5 295,383 - H281DRAFT_04178 0.71 +1.7 295,383 - H281DRAFT_04178 0.71 -0.6 295,401 + H281DRAFT_04178 0.73 -0.8 295,401 + H281DRAFT_04178 0.73 -1.1 295,401 + H281DRAFT_04178 0.73 -0.0 295,493 + H281DRAFT_04178 0.79 -0.3 295,493 + H281DRAFT_04178 0.79 -0.2 295,494 - H281DRAFT_04178 0.79 +0.3 295,494 - H281DRAFT_04178 0.79 -0.3 295,502 + H281DRAFT_04178 0.79 -0.5 295,503 - H281DRAFT_04178 0.79 -0.5 295,823 + -1.2 295,888 + +0.2 295,888 + -0.6 295,888 + +0.2 295,889 - -0.4 295,974 + -0.4 295,975 - -1.3 296,017 - -1.8 296,083 - -0.7 296,240 + H281DRAFT_04179 0.22 -1.0 296,240 + H281DRAFT_04179 0.22 -0.3 296,241 - H281DRAFT_04179 0.22 -1.6 296,241 - H281DRAFT_04179 0.22 -1.9 296,367 - H281DRAFT_04179 0.31 -1.1
Or see this region's nucleotide sequence