Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03966 and H281DRAFT_03967 are separated by 60 nucleotides H281DRAFT_03967 and H281DRAFT_03968 are separated by 16 nucleotides H281DRAFT_03968 and H281DRAFT_03969 are separated by 58 nucleotides H281DRAFT_03969 and H281DRAFT_03970 are separated by 34 nucleotides
H281DRAFT_03966: H281DRAFT_03966 - Dehydrogenase (flavoprotein), at 72,555 to 73,868
_03966
H281DRAFT_03967: H281DRAFT_03967 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 73,929 to 74,657
_03967
H281DRAFT_03968: H281DRAFT_03968 - hypothetical protein, at 74,674 to 75,117
_03968
H281DRAFT_03969: H281DRAFT_03969 - hypothetical protein, at 75,176 to 75,598
_03969
H281DRAFT_03970: H281DRAFT_03970 - 3-oxoacyl-[acyl-carrier-protein] synthase-1, at 75,633 to 76,871
_03970
Position (kb) 74
75
76 Strain fitness (log2 ratio) -2
-1
0
1
2 at 73.859 kb on + strand at 73.860 kb on - strand at 73.882 kb on + strand at 73.896 kb on - strand at 73.904 kb on + strand at 73.904 kb on + strand at 73.904 kb on + strand at 73.904 kb on + strand at 73.904 kb on + strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.909 kb on - strand at 73.909 kb on - strand at 74.170 kb on - strand, within H281DRAFT_03967 at 74.409 kb on + strand, within H281DRAFT_03967 at 74.409 kb on + strand, within H281DRAFT_03967 at 74.410 kb on - strand, within H281DRAFT_03967 at 74.410 kb on - strand, within H281DRAFT_03967 at 74.478 kb on + strand, within H281DRAFT_03967 at 74.539 kb on - strand, within H281DRAFT_03967 at 74.778 kb on - strand, within H281DRAFT_03968 at 74.899 kb on - strand, within H281DRAFT_03968 at 74.966 kb on + strand, within H281DRAFT_03968 at 74.967 kb on - strand, within H281DRAFT_03968 at 75.026 kb on + strand, within H281DRAFT_03968 at 75.031 kb on - strand, within H281DRAFT_03968 at 75.121 kb on + strand at 75.121 kb on + strand at 75.122 kb on - strand at 75.138 kb on + strand at 75.471 kb on + strand, within H281DRAFT_03969 at 75.618 kb on - strand at 75.794 kb on + strand, within H281DRAFT_03970 at 75.822 kb on - strand, within H281DRAFT_03970 at 75.822 kb on - strand, within H281DRAFT_03970 at 75.823 kb on + strand, within H281DRAFT_03970 at 75.823 kb on + strand, within H281DRAFT_03970 at 75.989 kb on - strand, within H281DRAFT_03970 at 75.989 kb on - strand, within H281DRAFT_03970 at 75.989 kb on - strand, within H281DRAFT_03970 at 76.106 kb on - strand, within H281DRAFT_03970
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 73,859 + +0.9 73,860 - +1.9 73,882 + +0.5 73,896 - +0.0 73,904 + -0.1 73,904 + +0.4 73,904 + +0.2 73,904 + +0.2 73,904 + +0.9 73,905 - +0.8 73,905 - +0.1 73,905 - +0.9 73,905 - +0.1 73,905 - -1.4 73,905 - -0.5 73,909 - -2.4 73,909 - +0.1 74,170 - H281DRAFT_03967 0.33 -0.6 74,409 + H281DRAFT_03967 0.66 +0.4 74,409 + H281DRAFT_03967 0.66 +0.5 74,410 - H281DRAFT_03967 0.66 +0.7 74,410 - H281DRAFT_03967 0.66 +0.3 74,478 + H281DRAFT_03967 0.75 +0.3 74,539 - H281DRAFT_03967 0.84 +0.1 74,778 - H281DRAFT_03968 0.23 -1.0 74,899 - H281DRAFT_03968 0.51 -0.4 74,966 + H281DRAFT_03968 0.66 -0.2 74,967 - H281DRAFT_03968 0.66 +1.0 75,026 + H281DRAFT_03968 0.79 +2.1 75,031 - H281DRAFT_03968 0.80 +0.5 75,121 + +1.0 75,121 + -0.4 75,122 - -0.3 75,138 + +0.2 75,471 + H281DRAFT_03969 0.70 +0.5 75,618 - +0.3 75,794 + H281DRAFT_03970 0.13 -0.6 75,822 - H281DRAFT_03970 0.15 -0.1 75,822 - H281DRAFT_03970 0.15 -0.1 75,823 + H281DRAFT_03970 0.15 +0.3 75,823 + H281DRAFT_03970 0.15 -0.5 75,989 - H281DRAFT_03970 0.29 -0.5 75,989 - H281DRAFT_03970 0.29 -1.0 75,989 - H281DRAFT_03970 0.29 +0.7 76,106 - H281DRAFT_03970 0.38 +1.1
Or see this region's nucleotide sequence