Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03302

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03301 and H281DRAFT_03302 are separated by 57 nucleotidesH281DRAFT_03302 and H281DRAFT_03303 are separated by 148 nucleotides H281DRAFT_03301: H281DRAFT_03301 - oxidoreductase alpha (molybdopterin) subunit, at 362,214 to 364,520 _03301 H281DRAFT_03302: H281DRAFT_03302 - Hemerythrin HHE cation binding domain-containing protein, at 364,578 to 365,165 _03302 H281DRAFT_03303: H281DRAFT_03303 - NAD+ synthase (glutamine-hydrolysing), at 365,314 to 367,362 _03303 Position (kb) 364 365 366Strain fitness (log2 ratio) -1 0 1at 363.981 kb on + strand, within H281DRAFT_03301at 364.673 kb on + strand, within H281DRAFT_03302at 364.674 kb on - strand, within H281DRAFT_03302at 364.682 kb on + strand, within H281DRAFT_03302at 365.106 kb on - strand, within H281DRAFT_03302at 365.513 kb on + strandat 365.628 kb on - strand, within H281DRAFT_03303at 365.628 kb on - strand, within H281DRAFT_03303

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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363,981 + H281DRAFT_03301 0.77 -0.7
364,673 + H281DRAFT_03302 0.16 -0.5
364,674 - H281DRAFT_03302 0.16 -0.1
364,682 + H281DRAFT_03302 0.18 +1.5
365,106 - H281DRAFT_03302 0.90 +1.0
365,513 + -0.6
365,628 - H281DRAFT_03303 0.15 -0.8
365,628 - H281DRAFT_03303 0.15 +0.7

Or see this region's nucleotide sequence