Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02243

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02242 and H281DRAFT_02243 are separated by 67 nucleotidesH281DRAFT_02243 and H281DRAFT_02244 are separated by 249 nucleotides H281DRAFT_02242: H281DRAFT_02242 - DNA protecting protein DprA, at 386,698 to 387,960 _02242 H281DRAFT_02243: H281DRAFT_02243 - Thiol-disulfide isomerase or thioredoxin, at 388,028 to 388,405 _02243 H281DRAFT_02244: H281DRAFT_02244 - DNA topoisomerase-3, at 388,655 to 391,324 _02244 Position (kb) 388 389Strain fitness (log2 ratio) -2 -1 0 1at 387.028 kb on - strand, within H281DRAFT_02242at 387.028 kb on - strand, within H281DRAFT_02242at 387.028 kb on - strand, within H281DRAFT_02242at 387.028 kb on - strand, within H281DRAFT_02242at 387.028 kb on - strand, within H281DRAFT_02242at 387.028 kb on - strand, within H281DRAFT_02242at 387.028 kb on - strand, within H281DRAFT_02242at 387.028 kb on - strand, within H281DRAFT_02242at 387.028 kb on - strand, within H281DRAFT_02242at 387.028 kb on - strand, within H281DRAFT_02242at 387.028 kb on - strand, within H281DRAFT_02242at 387.028 kb on - strand, within H281DRAFT_02242at 387.028 kb on - strand, within H281DRAFT_02242at 387.028 kb on - strand, within H281DRAFT_02242at 387.028 kb on - strand, within H281DRAFT_02242at 387.029 kb on + strand, within H281DRAFT_02242at 387.029 kb on + strand, within H281DRAFT_02242at 387.030 kb on - strand, within H281DRAFT_02242at 387.030 kb on - strand, within H281DRAFT_02242at 387.054 kb on + strand, within H281DRAFT_02242at 387.054 kb on + strand, within H281DRAFT_02242at 387.055 kb on - strand, within H281DRAFT_02242at 387.055 kb on - strand, within H281DRAFT_02242at 387.055 kb on - strand, within H281DRAFT_02242at 387.259 kb on + strand, within H281DRAFT_02242at 387.259 kb on + strand, within H281DRAFT_02242at 387.449 kb on + strand, within H281DRAFT_02242at 387.472 kb on - strand, within H281DRAFT_02242at 387.613 kb on - strand, within H281DRAFT_02242at 387.810 kb on - strand, within H281DRAFT_02242at 387.810 kb on - strand, within H281DRAFT_02242at 387.835 kb on + strandat 387.836 kb on - strandat 387.842 kb on + strandat 387.843 kb on - strandat 387.845 kb on + strandat 387.845 kb on + strandat 387.845 kb on + strandat 387.845 kb on + strandat 387.846 kb on - strandat 387.907 kb on + strandat 387.908 kb on - strandat 387.984 kb on + strandat 387.984 kb on + strandat 387.984 kb on + strandat 387.984 kb on + strandat 387.984 kb on + strandat 387.984 kb on + strandat 387.984 kb on + strandat 387.985 kb on - strandat 387.985 kb on - strandat 387.985 kb on - strandat 387.985 kb on - strandat 387.985 kb on - strandat 388.423 kb on + strandat 388.423 kb on + strandat 388.635 kb on + strandat 388.635 kb on + strandat 388.635 kb on + strandat 388.635 kb on + strandat 388.635 kb on + strandat 388.635 kb on + strandat 388.635 kb on + strandat 388.636 kb on - strandat 388.636 kb on - strandat 388.636 kb on - strandat 388.636 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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387,028 - H281DRAFT_02242 0.26 -0.2
387,028 - H281DRAFT_02242 0.26 +0.6
387,028 - H281DRAFT_02242 0.26 +0.1
387,028 - H281DRAFT_02242 0.26 -0.7
387,028 - H281DRAFT_02242 0.26 +0.2
387,028 - H281DRAFT_02242 0.26 -1.0
387,028 - H281DRAFT_02242 0.26 +0.4
387,028 - H281DRAFT_02242 0.26 -0.3
387,028 - H281DRAFT_02242 0.26 +0.8
387,028 - H281DRAFT_02242 0.26 -0.1
387,028 - H281DRAFT_02242 0.26 +0.0
387,028 - H281DRAFT_02242 0.26 +0.3
387,028 - H281DRAFT_02242 0.26 -2.1
387,028 - H281DRAFT_02242 0.26 -0.4
387,028 - H281DRAFT_02242 0.26 +0.6
387,029 + H281DRAFT_02242 0.26 +0.4
387,029 + H281DRAFT_02242 0.26 -0.0
387,030 - H281DRAFT_02242 0.26 -1.1
387,030 - H281DRAFT_02242 0.26 -0.8
387,054 + H281DRAFT_02242 0.28 +0.1
387,054 + H281DRAFT_02242 0.28 +0.8
387,055 - H281DRAFT_02242 0.28 -0.9
387,055 - H281DRAFT_02242 0.28 -2.7
387,055 - H281DRAFT_02242 0.28 -0.3
387,259 + H281DRAFT_02242 0.44 +0.9
387,259 + H281DRAFT_02242 0.44 -0.6
387,449 + H281DRAFT_02242 0.59 +0.3
387,472 - H281DRAFT_02242 0.61 +0.3
387,613 - H281DRAFT_02242 0.72 +1.1
387,810 - H281DRAFT_02242 0.88 +0.6
387,810 - H281DRAFT_02242 0.88 -0.2
387,835 + -0.5
387,836 - -0.0
387,842 + +0.3
387,843 - -0.0
387,845 + -0.0
387,845 + +0.6
387,845 + -0.7
387,845 + -0.3
387,846 - +0.1
387,907 + +1.1
387,908 - +0.3
387,984 + +0.4
387,984 + +0.4
387,984 + -0.1
387,984 + -0.4
387,984 + +0.7
387,984 + -1.2
387,984 + +0.4
387,985 - -2.2
387,985 - -1.8
387,985 - -1.0
387,985 - +0.0
387,985 - -0.4
388,423 + +0.5
388,423 + +0.5
388,635 + +0.2
388,635 + -0.1
388,635 + +0.5
388,635 + -0.8
388,635 + -0.6
388,635 + -1.5
388,635 + +0.2
388,636 - +0.7
388,636 - +0.3
388,636 - +1.2
388,636 - -0.9

Or see this region's nucleotide sequence