Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01857

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01856 and H281DRAFT_01857 are separated by 756 nucleotidesH281DRAFT_01857 and H281DRAFT_01858 are separated by 288 nucleotidesH281DRAFT_01858 and H281DRAFT_01859 are separated by 128 nucleotides H281DRAFT_01856: H281DRAFT_01856 - xylulose-5-phosphate/fructose-6-phosphate phosphoketolase, at 768,061 to 770,457 _01856 H281DRAFT_01857: H281DRAFT_01857 - hypothetical protein, at 771,214 to 771,471 _01857 H281DRAFT_01858: H281DRAFT_01858 - hypothetical protein, at 771,760 to 772,068 _01858 H281DRAFT_01859: H281DRAFT_01859 - Protein of unknown function (DUF3300), at 772,197 to 773,582 _01859 Position (kb) 771 772Strain fitness (log2 ratio) -1 0 1at 770.335 kb on + strandat 770.343 kb on - strandat 770.458 kb on - strandat 770.522 kb on + strandat 770.522 kb on + strandat 770.714 kb on + strandat 770.918 kb on - strandat 770.924 kb on + strandat 771.058 kb on + strandat 771.360 kb on + strand, within H281DRAFT_01857at 772.124 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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770,335 + +0.0
770,343 - +0.6
770,458 - +1.0
770,522 + -0.1
770,522 + +0.8
770,714 + -0.3
770,918 - -1.4
770,924 + +0.1
771,058 + -0.4
771,360 + H281DRAFT_01857 0.57 -0.2
772,124 - +1.3

Or see this region's nucleotide sequence