Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01333 and H281DRAFT_01334 are separated by 83 nucleotides H281DRAFT_01334 and H281DRAFT_01335 overlap by 31 nucleotides H281DRAFT_01335 and H281DRAFT_01336 are separated by 204 nucleotides
H281DRAFT_01333: H281DRAFT_01333 - pyrroloquinoline quinone biosynthesis protein E, at 173,257 to 174,459
_01333
H281DRAFT_01334: H281DRAFT_01334 - two component transcriptional regulator, LuxR family, at 174,543 to 175,205
_01334
H281DRAFT_01335: H281DRAFT_01335 - Signal transduction histidine kinase, at 175,175 to 176,197
_01335
H281DRAFT_01336: H281DRAFT_01336 - Outer membrane receptor proteins, mostly Fe transport, at 176,402 to 178,765
_01336
Position (kb) 175
176
177 Strain fitness (log2 ratio) -1
0
1 at 174.253 kb on + strand, within H281DRAFT_01333 at 174.254 kb on - strand, within H281DRAFT_01333 at 174.452 kb on - strand at 174.458 kb on - strand at 175.553 kb on + strand, within H281DRAFT_01335 at 175.554 kb on - strand, within H281DRAFT_01335 at 175.554 kb on - strand, within H281DRAFT_01335 at 175.797 kb on + strand, within H281DRAFT_01335 at 176.975 kb on + strand, within H281DRAFT_01336 at 176.976 kb on - strand, within H281DRAFT_01336 at 176.976 kb on - strand, within H281DRAFT_01336 at 177.125 kb on + strand, within H281DRAFT_01336 at 177.129 kb on - strand, within H281DRAFT_01336
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 174,253 + H281DRAFT_01333 0.83 -0.3 174,254 - H281DRAFT_01333 0.83 -0.2 174,452 - +0.3 174,458 - +0.4 175,553 + H281DRAFT_01335 0.37 +0.1 175,554 - H281DRAFT_01335 0.37 +0.6 175,554 - H281DRAFT_01335 0.37 -0.2 175,797 + H281DRAFT_01335 0.61 -1.3 176,975 + H281DRAFT_01336 0.24 -0.7 176,976 - H281DRAFT_01336 0.24 -1.2 176,976 - H281DRAFT_01336 0.24 +0.9 177,125 + H281DRAFT_01336 0.31 +0.0 177,129 - H281DRAFT_01336 0.31 +0.6
Or see this region's nucleotide sequence