Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01302 and H281DRAFT_01303 are separated by 108 nucleotides H281DRAFT_01303 and H281DRAFT_01304 are separated by 103 nucleotides H281DRAFT_01304 and H281DRAFT_01305 are separated by 91 nucleotides
H281DRAFT_01302: H281DRAFT_01302 - SSU ribosomal protein S6P modification protein, at 140,887 to 141,921
_01302
H281DRAFT_01303: H281DRAFT_01303 - triphosphoribosyl-dephospho-CoA synthase, at 142,030 to 142,968
_01303
H281DRAFT_01304: H281DRAFT_01304 - formaldehyde activating enzyme, at 143,072 to 143,581
_01304
H281DRAFT_01305: H281DRAFT_01305 - hypothetical protein, at 143,673 to 144,080
_01305
Position (kb) 142
143 Strain fitness (log2 ratio) -1
0
1 at 141.306 kb on + strand at 141.506 kb on - strand, within H281DRAFT_01302 at 142.804 kb on - strand, within H281DRAFT_01303 at 142.804 kb on - strand at 143.468 kb on + strand, within H281DRAFT_01304 at 143.475 kb on - strand, within H281DRAFT_01304 at 143.681 kb on - strand at 143.811 kb on + strand, within H281DRAFT_01305 at 143.904 kb on + strand, within H281DRAFT_01305 at 143.940 kb on + strand, within H281DRAFT_01305
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 141,306 + +1.4 141,506 - H281DRAFT_01302 0.60 -0.4 142,804 - H281DRAFT_01303 0.82 +0.9 142,804 - -0.4 143,468 + H281DRAFT_01304 0.78 +1.1 143,475 - H281DRAFT_01304 0.79 -0.7 143,681 - +0.1 143,811 + H281DRAFT_01305 0.34 -0.2 143,904 + H281DRAFT_01305 0.57 -0.5 143,940 + H281DRAFT_01305 0.65 -0.1
Or see this region's nucleotide sequence