Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01120 and H281DRAFT_01121 are separated by 119 nucleotides H281DRAFT_01121 and H281DRAFT_01122 are separated by 120 nucleotides H281DRAFT_01122 and H281DRAFT_01123 are separated by 136 nucleotides
H281DRAFT_01120: H281DRAFT_01120 - monosaccharide ABC transporter membrane protein, CUT2 family, at 1,262,624 to 1,263,625
_01120
H281DRAFT_01121: H281DRAFT_01121 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 1,263,745 to 1,264,920
_01121
H281DRAFT_01122: H281DRAFT_01122 - hypothetical protein, at 1,265,041 to 1,265,700
_01122
H281DRAFT_01123: H281DRAFT_01123 - transcriptional regulator, LysR family, at 1,265,837 to 1,266,736
_01123
Position (kb) 1263
1264
1265 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1263.240 kb on - strand, within H281DRAFT_01120 at 1263.240 kb on - strand, within H281DRAFT_01120 at 1263.703 kb on - strand at 1263.724 kb on + strand at 1263.725 kb on - strand at 1263.725 kb on - strand at 1264.225 kb on + strand, within H281DRAFT_01121 at 1264.226 kb on - strand, within H281DRAFT_01121 at 1264.304 kb on - strand, within H281DRAFT_01121 at 1264.417 kb on + strand, within H281DRAFT_01121 at 1265.132 kb on + strand, within H281DRAFT_01122 at 1265.693 kb on - strand at 1265.800 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 1,263,240 - H281DRAFT_01120 0.61 -1.8 1,263,240 - H281DRAFT_01120 0.61 -0.2 1,263,703 - +0.0 1,263,724 + -2.2 1,263,725 - +0.9 1,263,725 - +0.3 1,264,225 + H281DRAFT_01121 0.41 +1.4 1,264,226 - H281DRAFT_01121 0.41 +1.9 1,264,304 - H281DRAFT_01121 0.48 +0.3 1,264,417 + H281DRAFT_01121 0.57 +1.6 1,265,132 + H281DRAFT_01122 0.14 -0.6 1,265,693 - +0.1 1,265,800 + -0.2
Or see this region's nucleotide sequence