Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02898

Experiment: PYE_noCalcium 25C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep2 28 days
3,049,040	-		CCNA_02897	0.29	+0.6
3,049,050	+		CCNA_02897	0.29	-2.3
3,049,058	-		CCNA_02897	0.30	+0.7
3,049,086	+		CCNA_02897	0.33	+0.4
3,049,096	+		CCNA_02897	0.34	+1.2
3,049,101	+		CCNA_02897	0.34	-1.6
3,049,104	-		CCNA_02897	0.34	+1.4
3,049,127	+		CCNA_02897	0.36	+0.3
3,049,127	+		CCNA_02897	0.36	+3.4
3,049,127	+		CCNA_02897	0.36	-0.7
3,049,127	+		CCNA_02897	0.36	-0.1
3,049,132	+		CCNA_02897	0.37	+1.1
3,049,135	-		CCNA_02897	0.37	-1.8
3,049,135	-		CCNA_02897	0.37	-2.0
3,049,135	-		CCNA_02897	0.37	+0.2
3,049,148	-		CCNA_02897	0.38	-0.3
3,049,174	+		CCNA_02897	0.40	-1.0
3,049,174	+		CCNA_02897	0.40	-0.2
3,049,174	+		CCNA_02897	0.40	+0.2
3,049,174	+		CCNA_02897	0.40	+0.2
3,049,174	+		CCNA_02897	0.40	-0.8
3,049,174	+		CCNA_02897	0.40	-1.2
3,049,182	-		CCNA_02897	0.41	+0.7
3,049,182	-		CCNA_02897	0.41	+0.3
3,049,182	-		CCNA_02897	0.41	+0.9
3,049,182	-		CCNA_02897	0.41	+0.8
3,049,182	-		CCNA_02897	0.41	-0.6
3,049,182	-		CCNA_02897	0.41	+4.9
3,049,182	-		CCNA_02897	0.41	-0.0
3,049,182	-		CCNA_02897	0.41	-0.0
3,049,200	+		CCNA_02897	0.43	-0.2
3,049,201	+		CCNA_02897	0.43	-2.5
3,049,209	-		CCNA_02897	0.44	+0.5
3,049,234	+		CCNA_02897	0.46	+0.7
3,049,234	+		CCNA_02897	0.46	+0.3
3,049,234	+		CCNA_02897	0.46	-2.0
3,049,234	+		CCNA_02897	0.46	-0.3
3,049,235	-		CCNA_02897	0.46	+0.2
3,049,242	-		CCNA_02897	0.46	+0.2
3,049,242	-		CCNA_02897	0.46	-1.0
3,049,242	-		CCNA_02897	0.46	+1.6
3,049,242	-		CCNA_02897	0.46	-2.1
3,049,282	+		CCNA_02897	0.50	-0.1
3,049,282	+		CCNA_02897	0.50	-1.5
3,049,290	-		CCNA_02897	0.51	+1.2
3,049,328	+		CCNA_02897	0.54	+1.0
3,049,333	+		CCNA_02897	0.55	-0.3
3,049,336	-		CCNA_02897	0.55	-0.1
3,049,338	+		CCNA_02897	0.55	+0.5
3,049,341	-		CCNA_02897	0.55	-1.9
3,049,343	+		CCNA_02897	0.55	-1.6
3,049,346	-		CCNA_02897	0.56	-3.0
3,049,351	-		CCNA_02897	0.56	+0.3
3,049,351	-		CCNA_02897	0.56	+0.4
3,049,390	+		CCNA_02897	0.60	+0.6
3,049,390	+		CCNA_02897	0.60	-0.7
3,049,390	+		CCNA_02897	0.60	-0.6
3,049,391	+		CCNA_02897	0.60	+1.7
3,049,398	-		CCNA_02897	0.60	-2.6
3,049,398	-		CCNA_02897	0.60	+0.6
3,049,398	-		CCNA_02897	0.60	-0.6
3,049,399	-		CCNA_02897	0.60	-0.4
3,049,425	+		CCNA_02897	0.63	-0.6
3,049,501	+		CCNA_02897	0.70	-2.1
3,049,501	+		CCNA_02897	0.70	-0.8
3,049,509	-		CCNA_02897	0.70	-1.1
3,049,537	-		CCNA_02897	0.73	+0.5
3,049,539	+		CCNA_02897	0.73	+0.6
3,049,547	-				-0.0
3,049,553	+		CCNA_02897	0.74	+0.6
3,049,553	+		CCNA_02897	0.74	-0.6
3,049,553	+		CCNA_02897	0.74	+2.6
3,049,553	+		CCNA_02897	0.74	+0.6
3,049,553	+		CCNA_02897	0.74	+0.3
3,049,553	+		CCNA_02897	0.74	+3.7
3,049,561	-		CCNA_02897	0.75	+0.2
3,049,561	-		CCNA_02897	0.75	+1.0
3,049,561	-		CCNA_02897	0.75	-1.0
3,049,561	-		CCNA_02897	0.75	-0.2
3,049,561	-		CCNA_02897	0.75	+3.6
3,049,561	-		CCNA_02897	0.75	-1.4
3,049,561	-		CCNA_02897	0.75	-0.2
3,049,585	+		CCNA_02897	0.77	-1.2
3,049,588	-		CCNA_02897	0.77	-0.6
3,049,598	-		CCNA_02897	0.78	+0.5
3,049,665	+		CCNA_02897	0.84	-1.1
3,049,665	+		CCNA_02897	0.84	+2.3
3,049,665	+		CCNA_02897	0.84	+2.6
3,049,666	-		CCNA_02897	0.84	+1.5
3,049,679	+		CCNA_02897	0.85	-0.3
3,049,686	-		CCNA_02897	0.86	-1.6
3,049,759	+				+1.6
3,049,767	-				+2.0
3,049,767	-				-2.0
3,049,767	-				+0.4
3,049,767	-				+0.5
3,049,795	+				+1.3
3,049,803	-				-0.4
3,049,803	-				-1.8
3,049,826	+				+2.4
3,049,857	-				+0.3
3,049,926	+				+0.5
3,049,944	-				-1.1
3,049,958	-				+1.1
3,049,958	-				-0.0
3,049,980	-				+0.5
3,049,990	+				-2.1
3,050,010	-				+1.1
3,050,017	-				-0.9
3,050,017	-				-2.0
3,050,086	+				+0.6
3,050,086	+				-1.1
3,050,086	+				+0.4
3,050,087	+				-0.5
3,050,093	+				-0.0
3,050,094	-				+0.9
3,050,094	-				+0.2
3,050,098	+				-0.7
3,050,098	+				+1.6
3,050,098	+				-0.8
3,050,098	+				-0.0
3,050,098	+				-0.2
3,050,098	+				+0.7
3,050,106	-				-2.0
3,050,122	+				-1.1
3,050,126	-				+1.3
3,050,126	-				-0.7
3,050,130	-				+0.4
3,050,135	-				+0.7
3,050,184	+		CCNA_02898	0.11	+0.8
3,050,201	+		CCNA_02898	0.12	-1.1
3,050,206	+		CCNA_02898	0.13	+1.0
3,050,241	+		CCNA_02898	0.15	-0.2
3,050,241	+		CCNA_02898	0.15	+1.0
3,050,249	-		CCNA_02898	0.15	+2.6
3,050,249	-		CCNA_02898	0.15	+0.2
3,050,287	+		CCNA_02898	0.18	-0.9
3,050,295	-		CCNA_02898	0.18	-0.8
3,050,315	+		CCNA_02898	0.20	-0.9
3,050,315	+		CCNA_02898	0.20	-2.7
3,050,318	-		CCNA_02898	0.20	-0.5
3,050,320	+		CCNA_02898	0.20	+1.7
3,050,352	+		CCNA_02898	0.22	-0.0
3,050,371	+		CCNA_02898	0.23	+0.4
3,050,379	-		CCNA_02898	0.24	-1.2
3,050,394	+		CCNA_02898	0.25	-0.2
3,050,415	-		CCNA_02898	0.26	-1.1
3,050,420	+		CCNA_02898	0.27	-1.5
3,050,428	-		CCNA_02898	0.27	+2.9
3,050,428	-		CCNA_02898	0.27	+0.3
3,050,428	-		CCNA_02898	0.27	-2.1
3,050,450	-		CCNA_02898	0.29	-0.4
3,050,476	+		CCNA_02898	0.30	-1.1
3,050,476	+		CCNA_02898	0.30	+0.4
3,050,529	+		CCNA_02898	0.34	-0.4
3,050,532	-		CCNA_02898	0.34	-0.9
3,050,669	-		CCNA_02898	0.43	+0.2
3,050,674	-		CCNA_02898	0.43	-2.4
3,050,696	-		CCNA_02898	0.45	-0.2
3,050,721	-		CCNA_02898	0.46	-0.2
3,050,732	+		CCNA_02898	0.47	-1.8
3,050,739	-		CCNA_02898	0.48	+1.0
3,050,756	-		CCNA_02898	0.49	+0.5
3,050,758	-		CCNA_02898	0.49	-1.0
3,050,786	+		CCNA_02898	0.51	-1.5
3,050,786	+		CCNA_02898	0.51	-2.1
3,050,786	+		CCNA_02898	0.51	-1.0
3,050,786	-		CCNA_02898	0.51	-1.8
3,050,791	-		CCNA_02898	0.51	+1.2
3,050,791	-		CCNA_02898	0.51	-1.6
3,050,794	-		CCNA_02898	0.51	-0.8
3,050,837	+		CCNA_02898	0.54	+1.6
3,050,850	-		CCNA_02898	0.55	+2.3
3,050,864	+		CCNA_02898	0.56	-1.1
3,050,865	-		CCNA_02898	0.56	-1.8
3,050,909	-				+1.6
3,050,918	+		CCNA_02898	0.59	-0.1
3,050,921	-		CCNA_02898	0.59	-0.7
3,050,921	-		CCNA_02898	0.59	-0.0
3,050,931	-		CCNA_02898	0.60	-3.0
3,050,959	+		CCNA_02898	0.62	-1.3
3,050,967	-		CCNA_02898	0.62	-0.3
3,050,974	+		CCNA_02898	0.63	-2.3
3,050,997	-		CCNA_02898	0.64	-1.7
3,051,002	+		CCNA_02898	0.65	+2.6
3,051,016	+		CCNA_02898	0.66	+2.6
3,051,016	+		CCNA_02898	0.66	-2.7
3,051,017	+		CCNA_02898	0.66	-0.6
3,051,024	-		CCNA_02898	0.66	-2.0
3,051,027	+		CCNA_02898	0.66	-0.6
3,051,065	-		CCNA_02898	0.69	-1.3
3,051,072	+		CCNA_02898	0.69	-1.8
3,051,128	+		CCNA_02898	0.73	+2.6
3,051,139	-		CCNA_02898	0.74	-0.6
3,051,182	+		CCNA_02898	0.76	-1.2
3,051,198	-		CCNA_02898	0.78	-0.8
3,051,217	-		CCNA_02898	0.79	+1.6
3,051,243	+		CCNA_02898	0.80	-0.5
3,051,247	+		CCNA_02898	0.81	-0.1
3,051,255	-		CCNA_02898	0.81	+1.2
3,051,316	+		CCNA_02898	0.85	+0.9
3,051,316	-		CCNA_02898	0.85	+0.8
3,051,316	-		CCNA_02898	0.85	+0.7
3,051,324	-		CCNA_02898	0.86	-1.3
3,051,366	-		CCNA_02898	0.88	-1.5
3,051,388	+		CCNA_02898	0.90	-0.4
3,051,389	+				+0.6
3,051,404	-				+2.6
3,051,418	-				+0.2
3,051,461	-				-2.2
3,051,466	-				+0.8
3,051,466	-				+2.6
3,051,482	-				+0.3
3,051,491	+				+1.2
3,051,496	+				+0.9
3,051,504	-				-0.5
3,051,537	-				-2.8
3,051,542	+				-0.7
3,051,542	+				-2.4
3,051,549	-				+2.9
3,051,610	+				-3.0
3,051,621	-				+0.9
3,051,623	+				-1.5
3,051,641	-				-2.3
3,051,643	-				-2.7
3,051,669	+				+0.7
3,051,711	-		CCNA_02899	0.11	+1.3
3,051,734	+		CCNA_02899	0.13	-0.6
3,051,734	+		CCNA_02899	0.13	+2.2
3,051,822	+		CCNA_02899	0.19	-1.8
3,051,828	-		CCNA_02899	0.19	-0.6
3,051,832	-		CCNA_02899	0.19	-2.0
3,051,878	-		CCNA_02899	0.22	-0.4
3,051,886	-				+2.6
3,051,886	-		CCNA_02899	0.23	-2.4
3,051,887	-		CCNA_02899	0.23	-1.1
3,051,926	+		CCNA_02899	0.26	-1.0
3,051,941	+		CCNA_02899	0.27	-2.3
3,051,957	+		CCNA_02899	0.28	+0.4
3,051,980	-		CCNA_02899	0.29	+1.6
3,052,082	+		CCNA_02899	0.36	+1.0
3,052,090	-		CCNA_02899	0.37	+0.9
3,052,134	+		CCNA_02899	0.39	-3.2
3,052,202	+		CCNA_02899	0.44	-0.4
3,052,290	-		CCNA_02899	0.50	-0.3
3,052,295	-		CCNA_02899	0.50	+0.5
3,052,304	+		CCNA_02899	0.51	+0.6
3,052,357	-		CCNA_02899	0.54	-0.8
3,052,366	+		CCNA_02899	0.55	-1.0
3,052,375	+		CCNA_02899	0.55	-1.2
3,052,439	+		CCNA_02899	0.60	-2.9
3,052,470	-		CCNA_02899	0.62	+1.0
3,052,472	+		CCNA_02899	0.62	+0.4
3,052,477	+		CCNA_02899	0.62	+2.6
3,052,485	-		CCNA_02899	0.63	+0.6
3,052,495	-		CCNA_02899	0.63	-0.4
3,052,523	+		CCNA_02899	0.65	-0.0