Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2682 and DvMF_2683 are separated by 347 nucleotides DvMF_2683 and DvMF_2684 are separated by 62 nucleotides
DvMF_2682: DvMF_2682 - Membrane-bound lytic murein transglycosylase B-like protein (RefSeq), at 3,390,230 to 3,391,501
_2682
DvMF_2683: DvMF_2683 - multi-sensor hybrid histidine kinase (RefSeq), at 3,391,849 to 3,395,925
_2683
DvMF_2684: DvMF_2684 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 3,395,988 to 3,397,061
_2684
Position (kb)
3391
3392
3393
3394
3395
3396 Strain fitness (log2 ratio)
-1
0
1
2 at 3390.878 kb on + strand, within DvMF_2682 at 3391.148 kb on - strand, within DvMF_2682 at 3391.190 kb on - strand, within DvMF_2682 at 3391.197 kb on - strand, within DvMF_2682 at 3391.318 kb on - strand, within DvMF_2682 at 3391.420 kb on + strand at 3391.420 kb on - strand at 3391.435 kb on + strand at 3391.435 kb on + strand at 3391.435 kb on + strand at 3391.442 kb on + strand at 3391.443 kb on - strand at 3391.443 kb on - strand at 3391.545 kb on - strand at 3391.580 kb on + strand at 3391.799 kb on - strand at 3391.841 kb on - strand at 3391.842 kb on - strand at 3391.843 kb on + strand at 3391.969 kb on + strand at 3392.175 kb on - strand at 3392.177 kb on + strand at 3392.180 kb on - strand at 3392.186 kb on + strand at 3392.456 kb on + strand, within DvMF_2683 at 3392.473 kb on + strand, within DvMF_2683 at 3392.607 kb on - strand, within DvMF_2683 at 3392.820 kb on + strand, within DvMF_2683 at 3392.877 kb on + strand, within DvMF_2683 at 3393.376 kb on + strand, within DvMF_2683 at 3393.516 kb on - strand, within DvMF_2683 at 3393.661 kb on - strand, within DvMF_2683 at 3393.986 kb on - strand, within DvMF_2683 at 3394.213 kb on - strand, within DvMF_2683 at 3394.218 kb on - strand, within DvMF_2683 at 3394.431 kb on - strand, within DvMF_2683 at 3394.436 kb on - strand, within DvMF_2683 at 3394.884 kb on - strand, within DvMF_2683 at 3394.895 kb on - strand, within DvMF_2683 at 3395.159 kb on + strand, within DvMF_2683 at 3395.328 kb on - strand, within DvMF_2683 at 3395.648 kb on - strand at 3395.977 kb on - strand at 3396.057 kb on + strand at 3396.090 kb on + strand at 3396.266 kb on + strand, within DvMF_2684 at 3396.346 kb on + strand, within DvMF_2684 at 3396.356 kb on + strand, within DvMF_2684 at 3396.453 kb on + strand, within DvMF_2684 at 3396.456 kb on - strand, within DvMF_2684 at 3396.744 kb on + strand, within DvMF_2684 at 3396.861 kb on - strand, within DvMF_2684 at 3396.861 kb on - strand, within DvMF_2684
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 3,390,878 + DvMF_2682 0.51 -0.8 3,391,148 - DvMF_2682 0.72 -1.4 3,391,190 - DvMF_2682 0.75 +0.0 3,391,197 - DvMF_2682 0.76 -0.5 3,391,318 - DvMF_2682 0.86 -0.3 3,391,420 + -0.6 3,391,420 - -0.7 3,391,435 + +0.1 3,391,435 + -0.4 3,391,435 + +0.1 3,391,442 + -0.3 3,391,443 - +0.4 3,391,443 - -0.5 3,391,545 - -0.2 3,391,580 + +0.3 3,391,799 - -1.2 3,391,841 - -0.7 3,391,842 - -0.5 3,391,843 + +1.8 3,391,969 + +0.3 3,392,175 - -0.0 3,392,177 + +0.2 3,392,180 - +0.4 3,392,186 + +0.8 3,392,456 + DvMF_2683 0.15 +0.5 3,392,473 + DvMF_2683 0.15 -0.8 3,392,607 - DvMF_2683 0.19 +0.5 3,392,820 + DvMF_2683 0.24 +0.5 3,392,877 + DvMF_2683 0.25 +0.1 3,393,376 + DvMF_2683 0.37 +0.7 3,393,516 - DvMF_2683 0.41 +0.5 3,393,661 - DvMF_2683 0.44 +0.5 3,393,986 - DvMF_2683 0.52 +0.4 3,394,213 - DvMF_2683 0.58 +0.1 3,394,218 - DvMF_2683 0.58 +0.8 3,394,431 - DvMF_2683 0.63 +0.4 3,394,436 - DvMF_2683 0.63 +0.0 3,394,884 - DvMF_2683 0.74 +0.2 3,394,895 - DvMF_2683 0.75 +0.3 3,395,159 + DvMF_2683 0.81 +0.3 3,395,328 - DvMF_2683 0.85 +0.5 3,395,648 - +0.5 3,395,977 - +0.1 3,396,057 + -1.7 3,396,090 + +0.2 3,396,266 + DvMF_2684 0.26 -0.8 3,396,346 + DvMF_2684 0.33 -1.3 3,396,356 + DvMF_2684 0.34 -0.4 3,396,453 + DvMF_2684 0.43 -0.6 3,396,456 - DvMF_2684 0.44 -0.5 3,396,744 + DvMF_2684 0.70 -0.9 3,396,861 - DvMF_2684 0.81 +0.1 3,396,861 - DvMF_2684 0.81 -1.1
Or see this region's nucleotide sequence