Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2634 and DvMF_2635 are separated by 270 nucleotides DvMF_2635 and DvMF_2636 are separated by 206 nucleotides DvMF_2636 and DvMF_R0071 are separated by 741 nucleotides
DvMF_2634: DvMF_2634 - FAD dependent oxidoreductase (RefSeq), at 3,329,371 to 3,330,762
_2634
DvMF_2635: DvMF_2635 - hypothetical protein (RefSeq), at 3,331,033 to 3,331,260
_2635
DvMF_2636: DvMF_2636 - hypothetical protein (RefSeq), at 3,331,467 to 3,332,336
_2636
DvMF_R0071: DvMF_R0071 - tRNA-Glu (RefSeq), at 3,333,078 to 3,333,154
_R0071
Position (kb)
3331
3332
3333 Strain fitness (log2 ratio)
-1
0
1 at 3330.471 kb on - strand, within DvMF_2634 at 3330.811 kb on + strand at 3330.956 kb on + strand at 3331.032 kb on - strand at 3331.070 kb on - strand, within DvMF_2635 at 3331.351 kb on - strand at 3331.759 kb on - strand, within DvMF_2636 at 3331.839 kb on + strand, within DvMF_2636 at 3331.839 kb on + strand, within DvMF_2636 at 3331.862 kb on + strand, within DvMF_2636 at 3331.863 kb on - strand, within DvMF_2636 at 3331.897 kb on - strand, within DvMF_2636 at 3331.897 kb on - strand, within DvMF_2636 at 3332.578 kb on - strand at 3332.698 kb on + strand at 3332.698 kb on + strand at 3332.706 kb on - strand at 3332.924 kb on + strand at 3333.235 kb on + strand at 3333.255 kb on - strand at 3333.304 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 3,330,471 - DvMF_2634 0.79 -0.4 3,330,811 + -0.4 3,330,956 + -0.6 3,331,032 - -0.8 3,331,070 - DvMF_2635 0.16 -0.5 3,331,351 - -0.6 3,331,759 - DvMF_2636 0.34 -0.6 3,331,839 + DvMF_2636 0.43 -0.3 3,331,839 + DvMF_2636 0.43 -1.1 3,331,862 + DvMF_2636 0.45 -0.4 3,331,863 - DvMF_2636 0.46 -0.5 3,331,897 - DvMF_2636 0.49 -1.5 3,331,897 - DvMF_2636 0.49 -0.5 3,332,578 - -0.4 3,332,698 + -0.4 3,332,698 + -0.2 3,332,706 - -0.2 3,332,924 + -0.9 3,333,235 + -1.1 3,333,255 - -0.4 3,333,304 + +0.1
Or see this region's nucleotide sequence