Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0830 and DvMF_0831 are separated by 236 nucleotides DvMF_0831 and DvMF_0832 are separated by 151 nucleotides DvMF_0832 and DvMF_0833 are separated by 278 nucleotides
DvMF_0830: DvMF_0830 - HI0933 family protein (RefSeq), at 1,002,304 to 1,003,563
_0830
DvMF_0831: DvMF_0831 - protein of unknown function DUF21 (RefSeq), at 1,003,800 to 1,005,158
_0831
DvMF_0832: DvMF_0832 - hypothetical protein (RefSeq), at 1,005,310 to 1,005,576
_0832
DvMF_0833: DvMF_0833 - cobalamin biosynthesis protein CbiB (RefSeq), at 1,005,855 to 1,006,979
_0833
Position (kb)
1003
1004
1005
1006 Strain fitness (log2 ratio)
-1
0
1 at 1002.913 kb on + strand, within DvMF_0830 at 1002.985 kb on + strand, within DvMF_0830 at 1002.993 kb on - strand, within DvMF_0830 at 1003.000 kb on + strand, within DvMF_0830 at 1003.113 kb on - strand, within DvMF_0830 at 1003.147 kb on + strand, within DvMF_0830 at 1003.324 kb on + strand, within DvMF_0830 at 1003.329 kb on + strand, within DvMF_0830 at 1003.362 kb on - strand, within DvMF_0830 at 1003.459 kb on + strand at 1003.477 kb on - strand at 1003.796 kb on - strand at 1003.863 kb on - strand at 1003.965 kb on + strand, within DvMF_0831 at 1003.997 kb on + strand, within DvMF_0831 at 1003.997 kb on + strand, within DvMF_0831 at 1004.005 kb on - strand, within DvMF_0831 at 1004.085 kb on + strand, within DvMF_0831 at 1004.210 kb on - strand, within DvMF_0831 at 1004.212 kb on + strand, within DvMF_0831 at 1004.212 kb on + strand, within DvMF_0831 at 1004.233 kb on + strand, within DvMF_0831 at 1004.505 kb on + strand, within DvMF_0831 at 1004.742 kb on + strand, within DvMF_0831 at 1004.742 kb on + strand, within DvMF_0831 at 1004.743 kb on - strand, within DvMF_0831 at 1005.042 kb on - strand at 1005.238 kb on + strand at 1005.246 kb on - strand at 1005.436 kb on + strand, within DvMF_0832 at 1005.705 kb on + strand at 1005.723 kb on - strand at 1005.795 kb on + strand at 1005.838 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 1,002,913 + DvMF_0830 0.48 -0.3 1,002,985 + DvMF_0830 0.54 -0.3 1,002,993 - DvMF_0830 0.55 -0.3 1,003,000 + DvMF_0830 0.55 -0.2 1,003,113 - DvMF_0830 0.64 -0.5 1,003,147 + DvMF_0830 0.67 -0.4 1,003,324 + DvMF_0830 0.81 -0.5 1,003,329 + DvMF_0830 0.81 -0.7 1,003,362 - DvMF_0830 0.84 -0.1 1,003,459 + +0.1 1,003,477 - -0.6 1,003,796 - -0.6 1,003,863 - -0.2 1,003,965 + DvMF_0831 0.12 -0.3 1,003,997 + DvMF_0831 0.14 -0.4 1,003,997 + DvMF_0831 0.14 +0.1 1,004,005 - DvMF_0831 0.15 -0.4 1,004,085 + DvMF_0831 0.21 -0.3 1,004,210 - DvMF_0831 0.30 +0.1 1,004,212 + DvMF_0831 0.30 +1.3 1,004,212 + DvMF_0831 0.30 -0.0 1,004,233 + DvMF_0831 0.32 -0.2 1,004,505 + DvMF_0831 0.52 -0.3 1,004,742 + DvMF_0831 0.69 -0.3 1,004,742 + DvMF_0831 0.69 -0.1 1,004,743 - DvMF_0831 0.69 +0.2 1,005,042 - -0.4 1,005,238 + -0.2 1,005,246 - -1.4 1,005,436 + DvMF_0832 0.47 -0.6 1,005,705 + -0.9 1,005,723 - -0.2 1,005,795 + -0.6 1,005,838 - -1.1
Or see this region's nucleotide sequence