Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0654 and DvMF_0655 are separated by 602 nucleotides DvMF_0655 and DvMF_0656 are separated by 97 nucleotides
DvMF_0654: DvMF_0654 - Amidohydrolase 3 (RefSeq), at 787,496 to 789,118
_0654
DvMF_0655: DvMF_0655 - ABC transporter related (RefSeq), at 789,721 to 790,773
_0655
DvMF_0656: DvMF_0656 - extracellular solute-binding protein family 1 (RefSeq), at 790,871 to 792,166
_0656
Position (kb) 789
790
791 Strain fitness (log2 ratio) -2
-1
0
1 at 788.768 kb on + strand, within DvMF_0654 at 788.790 kb on + strand, within DvMF_0654 at 788.883 kb on - strand, within DvMF_0654 at 789.113 kb on + strand at 789.264 kb on + strand at 789.418 kb on - strand at 789.429 kb on - strand at 789.476 kb on - strand at 789.625 kb on + strand at 789.674 kb on - strand at 789.854 kb on - strand, within DvMF_0655 at 789.871 kb on + strand, within DvMF_0655 at 789.925 kb on + strand, within DvMF_0655 at 790.087 kb on - strand, within DvMF_0655 at 790.140 kb on + strand, within DvMF_0655 at 790.147 kb on + strand, within DvMF_0655 at 790.400 kb on + strand, within DvMF_0655 at 790.559 kb on - strand, within DvMF_0655 at 790.578 kb on - strand, within DvMF_0655 at 790.621 kb on - strand, within DvMF_0655 at 790.778 kb on + strand at 790.805 kb on - strand at 791.053 kb on + strand, within DvMF_0656 at 791.094 kb on + strand, within DvMF_0656 at 791.278 kb on - strand, within DvMF_0656 at 791.456 kb on + strand, within DvMF_0656 at 791.510 kb on + strand, within DvMF_0656 at 791.574 kb on - strand, within DvMF_0656 at 791.621 kb on + strand, within DvMF_0656
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 788,768 + DvMF_0654 0.78 -0.4 788,790 + DvMF_0654 0.80 -0.1 788,883 - DvMF_0654 0.85 -0.5 789,113 + -0.1 789,264 + +0.1 789,418 - -0.6 789,429 - -1.3 789,476 - -0.3 789,625 + -0.4 789,674 - -0.5 789,854 - DvMF_0655 0.13 -1.5 789,871 + DvMF_0655 0.14 -0.6 789,925 + DvMF_0655 0.19 -0.8 790,087 - DvMF_0655 0.35 -1.4 790,140 + DvMF_0655 0.40 -0.6 790,147 + DvMF_0655 0.40 -0.1 790,400 + DvMF_0655 0.64 -0.5 790,559 - DvMF_0655 0.80 -0.3 790,578 - DvMF_0655 0.81 -0.8 790,621 - DvMF_0655 0.85 -0.7 790,778 + -0.4 790,805 - -0.4 791,053 + DvMF_0656 0.14 -0.5 791,094 + DvMF_0656 0.17 -0.5 791,278 - DvMF_0656 0.31 -0.5 791,456 + DvMF_0656 0.45 -0.6 791,510 + DvMF_0656 0.49 -1.8 791,574 - DvMF_0656 0.54 -0.5 791,621 + DvMF_0656 0.58 -0.7
Or see this region's nucleotide sequence