Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0616 and DvMF_0617 are separated by 358 nucleotides DvMF_0617 and DvMF_0618 are separated by 235 nucleotides
DvMF_0616: DvMF_0616 - signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq), at 730,088 to 732,814
_0616
DvMF_0617: DvMF_0617 - diguanylate cyclase/phosphodiesterase (RefSeq), at 733,173 to 735,824
_0617
DvMF_0618: DvMF_0618 - hypothetical protein (RefSeq), at 736,060 to 736,821
_0618
Position (kb) 733
734
735
736 Strain fitness (log2 ratio) -1
0
1 at 732.506 kb on - strand, within DvMF_0616 at 732.526 kb on + strand, within DvMF_0616 at 732.600 kb on + strand at 732.608 kb on - strand at 732.803 kb on + strand at 732.803 kb on + strand at 732.803 kb on + strand at 732.953 kb on - strand at 732.990 kb on - strand at 733.027 kb on - strand at 733.489 kb on - strand, within DvMF_0617 at 733.914 kb on - strand, within DvMF_0617 at 733.916 kb on + strand, within DvMF_0617 at 733.924 kb on - strand, within DvMF_0617 at 733.924 kb on - strand, within DvMF_0617 at 733.944 kb on + strand, within DvMF_0617 at 734.000 kb on + strand, within DvMF_0617 at 734.048 kb on - strand, within DvMF_0617 at 734.048 kb on - strand, within DvMF_0617 at 734.098 kb on + strand, within DvMF_0617 at 734.114 kb on + strand, within DvMF_0617 at 734.140 kb on - strand, within DvMF_0617 at 734.570 kb on + strand, within DvMF_0617 at 734.889 kb on + strand, within DvMF_0617 at 735.035 kb on - strand, within DvMF_0617 at 735.037 kb on + strand, within DvMF_0617 at 735.037 kb on + strand, within DvMF_0617 at 735.112 kb on - strand, within DvMF_0617 at 735.285 kb on + strand, within DvMF_0617 at 735.434 kb on + strand, within DvMF_0617 at 735.454 kb on - strand, within DvMF_0617 at 735.872 kb on - strand at 736.007 kb on - strand at 736.197 kb on + strand, within DvMF_0618 at 736.207 kb on + strand, within DvMF_0618 at 736.230 kb on + strand, within DvMF_0618 at 736.255 kb on - strand, within DvMF_0618 at 736.255 kb on - strand, within DvMF_0618 at 736.287 kb on + strand, within DvMF_0618 at 736.327 kb on + strand, within DvMF_0618 at 736.345 kb on - strand, within DvMF_0618 at 736.360 kb on - strand, within DvMF_0618 at 736.385 kb on - strand, within DvMF_0618 at 736.403 kb on - strand, within DvMF_0618 at 736.415 kb on - strand, within DvMF_0618 at 736.455 kb on - strand, within DvMF_0618 at 736.487 kb on + strand, within DvMF_0618 at 736.529 kb on - strand, within DvMF_0618
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 732,506 - DvMF_0616 0.89 +0.5 732,526 + DvMF_0616 0.89 -0.7 732,600 + -0.1 732,608 - -0.3 732,803 + -0.1 732,803 + -0.3 732,803 + -0.4 732,953 - +0.3 732,990 - -0.0 733,027 - -0.2 733,489 - DvMF_0617 0.12 -0.3 733,914 - DvMF_0617 0.28 -0.0 733,916 + DvMF_0617 0.28 -0.5 733,924 - DvMF_0617 0.28 -0.2 733,924 - DvMF_0617 0.28 +0.1 733,944 + DvMF_0617 0.29 -0.1 734,000 + DvMF_0617 0.31 -0.5 734,048 - DvMF_0617 0.33 -0.5 734,048 - DvMF_0617 0.33 -0.3 734,098 + DvMF_0617 0.35 -0.3 734,114 + DvMF_0617 0.35 -0.3 734,140 - DvMF_0617 0.36 -0.2 734,570 + DvMF_0617 0.53 -0.2 734,889 + DvMF_0617 0.65 -0.2 735,035 - DvMF_0617 0.70 +0.7 735,037 + DvMF_0617 0.70 +0.2 735,037 + DvMF_0617 0.70 -0.2 735,112 - DvMF_0617 0.73 -0.4 735,285 + DvMF_0617 0.80 -0.6 735,434 + DvMF_0617 0.85 -0.4 735,454 - DvMF_0617 0.86 +0.7 735,872 - -0.7 736,007 - -0.5 736,197 + DvMF_0618 0.18 -0.1 736,207 + DvMF_0618 0.19 -0.7 736,230 + DvMF_0618 0.22 +0.8 736,255 - DvMF_0618 0.26 -0.3 736,255 - DvMF_0618 0.26 -0.5 736,287 + DvMF_0618 0.30 -0.4 736,327 + DvMF_0618 0.35 +0.1 736,345 - DvMF_0618 0.37 -0.4 736,360 - DvMF_0618 0.39 -0.5 736,385 - DvMF_0618 0.43 -0.9 736,403 - DvMF_0618 0.45 -0.1 736,415 - DvMF_0618 0.47 -0.6 736,455 - DvMF_0618 0.52 -0.3 736,487 + DvMF_0618 0.56 -0.4 736,529 - DvMF_0618 0.62 -0.4
Or see this region's nucleotide sequence