Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0310 and DvMF_0311 are separated by 368 nucleotides DvMF_0311 and DvMF_0312 are separated by 15 nucleotides DvMF_0312 and DvMF_0313 are separated by 462 nucleotides
DvMF_0310: DvMF_0310 - PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq), at 358,970 to 359,254
_0310
DvMF_0311: DvMF_0311 - heat shock protein Hsp20 (RefSeq), at 359,623 to 360,051
_0311
DvMF_0312: DvMF_0312 - peptidase S16 lon domain protein (RefSeq), at 360,067 to 362,688
_0312
DvMF_0313: DvMF_0313 - hypothetical protein (RefSeq), at 363,151 to 363,390
_0313
Position (kb) 360
361
362
363 Strain fitness (log2 ratio) -2
-1
0
1 at 359.334 kb on + strand at 359.561 kb on + strand at 359.697 kb on + strand, within DvMF_0311 at 359.810 kb on + strand, within DvMF_0311 at 360.005 kb on + strand, within DvMF_0311 at 360.013 kb on - strand at 360.040 kb on - strand at 360.208 kb on + strand at 360.242 kb on + strand at 360.347 kb on - strand, within DvMF_0312 at 360.459 kb on + strand, within DvMF_0312 at 360.475 kb on + strand, within DvMF_0312 at 360.502 kb on + strand, within DvMF_0312 at 360.502 kb on + strand, within DvMF_0312 at 360.669 kb on + strand, within DvMF_0312 at 360.693 kb on - strand, within DvMF_0312 at 360.892 kb on + strand, within DvMF_0312 at 360.913 kb on - strand, within DvMF_0312 at 360.926 kb on - strand, within DvMF_0312 at 361.051 kb on - strand, within DvMF_0312 at 361.121 kb on - strand, within DvMF_0312 at 361.204 kb on + strand, within DvMF_0312 at 361.459 kb on - strand, within DvMF_0312 at 361.459 kb on - strand, within DvMF_0312 at 362.035 kb on - strand, within DvMF_0312 at 362.037 kb on + strand, within DvMF_0312 at 362.037 kb on + strand, within DvMF_0312 at 362.195 kb on - strand, within DvMF_0312 at 362.210 kb on - strand, within DvMF_0312 at 362.239 kb on + strand, within DvMF_0312 at 362.240 kb on - strand, within DvMF_0312 at 362.335 kb on + strand, within DvMF_0312 at 362.378 kb on + strand, within DvMF_0312 at 362.410 kb on + strand, within DvMF_0312 at 362.444 kb on - strand at 362.453 kb on + strand at 362.458 kb on + strand at 362.489 kb on + strand at 363.125 kb on + strand at 363.305 kb on - strand, within DvMF_0313 at 363.365 kb on - strand, within DvMF_0313 at 363.537 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 359,334 + -0.2 359,561 + -2.7 359,697 + DvMF_0311 0.17 -0.5 359,810 + DvMF_0311 0.44 -0.8 360,005 + DvMF_0311 0.89 -0.2 360,013 - -0.8 360,040 - -0.5 360,208 + -0.2 360,242 + -0.7 360,347 - DvMF_0312 0.11 -0.2 360,459 + DvMF_0312 0.15 +0.1 360,475 + DvMF_0312 0.16 -0.4 360,502 + DvMF_0312 0.17 -0.3 360,502 + DvMF_0312 0.17 -0.1 360,669 + DvMF_0312 0.23 -0.4 360,693 - DvMF_0312 0.24 -0.5 360,892 + DvMF_0312 0.31 +0.1 360,913 - DvMF_0312 0.32 +0.4 360,926 - DvMF_0312 0.33 -0.2 361,051 - DvMF_0312 0.38 +0.4 361,121 - DvMF_0312 0.40 -0.1 361,204 + DvMF_0312 0.43 -0.3 361,459 - DvMF_0312 0.53 -0.1 361,459 - DvMF_0312 0.53 -0.8 362,035 - DvMF_0312 0.75 -0.0 362,037 + DvMF_0312 0.75 -0.3 362,037 + DvMF_0312 0.75 -0.4 362,195 - DvMF_0312 0.81 +0.0 362,210 - DvMF_0312 0.82 +0.2 362,239 + DvMF_0312 0.83 -0.5 362,240 - DvMF_0312 0.83 +1.2 362,335 + DvMF_0312 0.86 -0.2 362,378 + DvMF_0312 0.88 -0.5 362,410 + DvMF_0312 0.89 +0.0 362,444 - +0.4 362,453 + +0.8 362,458 + -0.5 362,489 + -0.3 363,125 + -0.4 363,305 - DvMF_0313 0.64 -0.4 363,365 - DvMF_0313 0.89 -1.0 363,537 + -0.1
Or see this region's nucleotide sequence