Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0303 and DvMF_0304 are separated by 73 nucleotides DvMF_0304 and DvMF_0305 are separated by 267 nucleotides
DvMF_0303: DvMF_0303 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 348,603 to 350,378
_0303
DvMF_0304: DvMF_0304 - putative cache sensor protein (RefSeq), at 350,452 to 350,910
_0304
DvMF_0305: DvMF_0305 - split soret cytochrome c precursor (RefSeq), at 351,178 to 352,026
_0305
Position (kb) 350
351 Strain fitness (log2 ratio) -2
-1
0
1 at 349.503 kb on - strand, within DvMF_0303 at 349.752 kb on + strand, within DvMF_0303 at 349.752 kb on + strand, within DvMF_0303 at 349.757 kb on + strand, within DvMF_0303 at 349.757 kb on + strand, within DvMF_0303 at 349.765 kb on - strand, within DvMF_0303 at 349.877 kb on - strand, within DvMF_0303 at 349.877 kb on - strand, within DvMF_0303 at 350.019 kb on - strand, within DvMF_0303 at 350.064 kb on + strand, within DvMF_0303 at 350.072 kb on - strand, within DvMF_0303 at 350.072 kb on - strand, within DvMF_0303 at 350.175 kb on + strand, within DvMF_0303 at 350.380 kb on + strand at 350.449 kb on - strand at 350.734 kb on - strand, within DvMF_0304 at 350.788 kb on + strand, within DvMF_0304 at 350.862 kb on + strand, within DvMF_0304 at 351.134 kb on + strand at 351.164 kb on + strand at 351.233 kb on + strand at 351.288 kb on + strand, within DvMF_0305 at 351.518 kb on + strand, within DvMF_0305 at 351.545 kb on - strand, within DvMF_0305 at 351.619 kb on - strand, within DvMF_0305 at 351.629 kb on - strand, within DvMF_0305 at 351.771 kb on + strand, within DvMF_0305 at 351.785 kb on + strand, within DvMF_0305 at 351.822 kb on - strand, within DvMF_0305 at 351.874 kb on + strand, within DvMF_0305
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 349,503 - DvMF_0303 0.51 -0.2 349,752 + DvMF_0303 0.65 -0.2 349,752 + DvMF_0303 0.65 -0.3 349,757 + DvMF_0303 0.65 -0.2 349,757 + DvMF_0303 0.65 +0.4 349,765 - DvMF_0303 0.65 +0.3 349,877 - DvMF_0303 0.72 -0.6 349,877 - DvMF_0303 0.72 -0.2 350,019 - DvMF_0303 0.80 -0.5 350,064 + DvMF_0303 0.82 -0.8 350,072 - DvMF_0303 0.83 -0.9 350,072 - DvMF_0303 0.83 +0.3 350,175 + DvMF_0303 0.89 -1.3 350,380 + -0.3 350,449 - -0.1 350,734 - DvMF_0304 0.61 -1.3 350,788 + DvMF_0304 0.73 -1.1 350,862 + DvMF_0304 0.89 -1.9 351,134 + -0.2 351,164 + +0.4 351,233 + -0.3 351,288 + DvMF_0305 0.13 -0.6 351,518 + DvMF_0305 0.40 -0.4 351,545 - DvMF_0305 0.43 -1.0 351,619 - DvMF_0305 0.52 -0.3 351,629 - DvMF_0305 0.53 -0.6 351,771 + DvMF_0305 0.70 +0.3 351,785 + DvMF_0305 0.71 -0.3 351,822 - DvMF_0305 0.76 -1.0 351,874 + DvMF_0305 0.82 -0.4
Or see this region's nucleotide sequence