Strain Fitness in Pantoea sp. MT58 around IAI47_17630

Experiment: Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,739,339	+				+0.7
3,739,340	-				+0.7
3,739,342	-				-0.0
3,739,342	-				+0.3
3,739,386	+				-1.3
3,739,386	+				-0.7
3,739,387	-				+0.8
3,739,477	+		IAI47_17625	0.19	-1.3
3,739,477	+		IAI47_17625	0.19	-0.4
3,739,477	+		IAI47_17625	0.19	-0.0
3,739,477	+		IAI47_17625	0.19	-0.4
3,739,478	-		IAI47_17625	0.19	+0.8
3,739,478	-		IAI47_17625	0.19	-1.1
3,739,519	+		IAI47_17625	0.24	+0.1
3,739,520	-		IAI47_17625	0.24	-0.7
3,739,546	+		IAI47_17625	0.27	-3.0
3,739,546	+		IAI47_17625	0.27	+0.4
3,739,590	+		IAI47_17625	0.32	-0.8
3,739,590	+		IAI47_17625	0.32	-0.6
3,739,590	+		IAI47_17625	0.32	+0.3
3,739,591	-		IAI47_17625	0.32	-0.3
3,739,593	+		IAI47_17625	0.32	+0.7
3,739,593	+		IAI47_17625	0.32	+0.3
3,739,593	+		IAI47_17625	0.32	+1.4
3,739,593	+		IAI47_17625	0.32	-1.0
3,739,593	+		IAI47_17625	0.32	+1.0
3,739,593	+		IAI47_17625	0.32	-0.0
3,739,593	+		IAI47_17625	0.32	-0.0
3,739,593	+		IAI47_17625	0.32	-1.6
3,739,594	-		IAI47_17625	0.32	-1.4
3,739,594	-		IAI47_17625	0.32	-1.3
3,739,594	-		IAI47_17625	0.32	-1.2
3,739,594	-		IAI47_17625	0.32	+0.6
3,739,634	+		IAI47_17625	0.36	-1.1
3,739,634	+		IAI47_17625	0.36	-0.1
3,739,635	-		IAI47_17625	0.37	-0.0
3,739,635	-		IAI47_17625	0.37	+0.3
3,739,692	+		IAI47_17625	0.43	-0.1
3,739,716	+		IAI47_17625	0.46	+0.4
3,739,716	+		IAI47_17625	0.46	-0.2
3,739,716	+		IAI47_17625	0.46	-0.6
3,739,716	+		IAI47_17625	0.46	-0.6
3,739,716	+		IAI47_17625	0.46	-0.2
3,739,716	+		IAI47_17625	0.46	-0.0
3,739,717	-		IAI47_17625	0.46	-0.6
3,739,717	-		IAI47_17625	0.46	+0.8
3,739,717	-		IAI47_17625	0.46	-1.3
3,739,717	-		IAI47_17625	0.46	-0.3
3,739,717	-		IAI47_17625	0.46	-0.5
3,739,717	-		IAI47_17625	0.46	-0.3
3,739,717	-		IAI47_17625	0.46	+0.2
3,739,717	-		IAI47_17625	0.46	+2.4
3,739,717	-		IAI47_17625	0.46	+3.8
3,739,749	+		IAI47_17625	0.49	+0.1
3,739,749	+		IAI47_17625	0.49	-1.9
3,739,749	+		IAI47_17625	0.49	-0.4
3,739,749	+		IAI47_17625	0.49	-0.3
3,739,749	+		IAI47_17625	0.49	-0.7
3,739,749	+		IAI47_17625	0.49	+0.3
3,739,750	-		IAI47_17625	0.49	-0.6
3,739,750	-		IAI47_17625	0.49	-1.8
3,739,750	-		IAI47_17625	0.49	-3.4
3,739,750	-		IAI47_17625	0.49	+1.4
3,739,750	-		IAI47_17625	0.49	-0.3
3,739,750	-		IAI47_17625	0.49	+0.6
3,739,750	-		IAI47_17625	0.49	-0.6
3,739,753	+		IAI47_17625	0.50	-2.0
3,739,753	+		IAI47_17625	0.50	+0.5
3,739,753	+		IAI47_17625	0.50	-1.4
3,739,753	+		IAI47_17625	0.50	+0.1
3,739,753	+		IAI47_17625	0.50	+0.4
3,739,753	+		IAI47_17625	0.50	-0.6
3,739,753	+		IAI47_17625	0.50	+0.9
3,739,753	+		IAI47_17625	0.50	-1.3
3,739,754	-		IAI47_17625	0.50	-0.2
3,739,754	-		IAI47_17625	0.50	+1.0
3,739,754	-		IAI47_17625	0.50	-1.5
3,739,754	-		IAI47_17625	0.50	+0.8
3,739,754	-		IAI47_17625	0.50	-2.2
3,739,754	-		IAI47_17625	0.50	+0.8
3,739,754	-		IAI47_17625	0.50	-1.3
3,739,754	-		IAI47_17625	0.50	-0.2
3,739,798	+		IAI47_17625	0.55	-0.6
3,739,798	+		IAI47_17625	0.55	+0.4
3,739,798	+		IAI47_17625	0.55	+0.5
3,739,798	+		IAI47_17625	0.55	-0.2
3,739,798	+		IAI47_17625	0.55	-0.2
3,739,799	-		IAI47_17625	0.55	-0.4
3,739,799	-		IAI47_17625	0.55	-0.9
3,739,799	-		IAI47_17625	0.55	-1.6
3,739,799	-		IAI47_17625	0.55	-0.9
3,739,842	+		IAI47_17625	0.60	+0.0
3,739,862	+		IAI47_17625	0.62	-1.0
3,739,862	+		IAI47_17625	0.62	-0.9
3,739,862	+		IAI47_17625	0.62	-0.5
3,739,862	+		IAI47_17625	0.62	+0.1
3,739,862	+		IAI47_17625	0.62	-0.1
3,739,863	-		IAI47_17625	0.62	-1.5
3,739,863	-		IAI47_17625	0.62	+2.5
3,739,863	-		IAI47_17625	0.62	-1.0
3,739,910	-		IAI47_17625	0.67	-0.1
3,739,910	-		IAI47_17625	0.67	+0.6
3,740,006	-		IAI47_17625	0.78	+0.9
3,740,047	+		IAI47_17625	0.82	+0.6
3,740,097	-		IAI47_17625	0.88	-0.2
3,740,203	+				+0.9
3,740,203	+				+0.3
3,740,203	+				-0.3
3,740,203	+				-0.1
3,740,204	-				+0.1
3,740,226	-				+0.1
3,740,239	+				+0.4
3,740,240	-				+0.4
3,740,250	+				-1.4
3,740,250	+				-0.6
3,740,250	+				-1.3
3,740,250	+				-1.6
3,740,250	+				+1.5
3,740,250	+				-1.7
3,740,251	-				+2.4
3,740,251	-				+0.4
3,740,251	-				-0.3
3,740,251	-				-0.1
3,740,251	-				+2.8
3,740,272	+				+0.3
3,740,272	+				+1.3
3,740,390	+				-1.3
3,740,390	+				+1.9
3,740,391	-				-0.3
3,740,430	+				-0.4
3,740,430	+				-1.3
3,740,430	+				+0.8
3,740,430	+				+0.4
3,740,449	+				-1.3
3,740,449	+				+1.0
3,740,449	+				+0.2
3,740,450	-		IAI47_17630	0.10	-0.9
3,740,450	-		IAI47_17630	0.10	+2.7
3,740,450	-		IAI47_17630	0.10	+0.6
3,740,459	+		IAI47_17630	0.11	+0.6
3,740,460	-		IAI47_17630	0.11	-0.1
3,740,511	+		IAI47_17630	0.15	+0.1
3,740,511	+		IAI47_17630	0.15	+0.2
3,740,512	-		IAI47_17630	0.15	-0.7
3,740,512	-		IAI47_17630	0.15	+1.2
3,740,526	+		IAI47_17630	0.16	-0.6
3,740,527	-		IAI47_17630	0.16	-1.6
3,740,666	-		IAI47_17630	0.26	-0.3
3,740,706	+		IAI47_17630	0.30	+0.1
3,740,842	+		IAI47_17630	0.40	+0.8
3,740,842	+		IAI47_17630	0.40	+0.3
3,740,843	-		IAI47_17630	0.40	+0.5
3,740,930	-		IAI47_17630	0.47	-0.4
3,740,973	+		IAI47_17630	0.50	-0.1
3,740,973	+		IAI47_17630	0.50	-0.3
3,740,974	-		IAI47_17630	0.50	+0.7
3,740,974	-		IAI47_17630	0.50	+0.7
3,740,999	-		IAI47_17630	0.52	+0.7
3,741,001	+		IAI47_17630	0.52	-0.8
3,741,001	+		IAI47_17630	0.52	+1.0
3,741,001	+		IAI47_17630	0.52	+2.6
3,741,001	+		IAI47_17630	0.52	+2.5
3,741,001	+		IAI47_17630	0.52	-0.4
3,741,001	+		IAI47_17630	0.52	+0.4
3,741,001	+		IAI47_17630	0.52	+1.7
3,741,001	+		IAI47_17630	0.52	+0.2
3,741,001	+		IAI47_17630	0.52	+0.8
3,741,002	-		IAI47_17630	0.52	+0.3
3,741,002	-		IAI47_17630	0.52	-1.0
3,741,002	-		IAI47_17630	0.52	-0.7
3,741,002	-		IAI47_17630	0.52	-1.2
3,741,002	-		IAI47_17630	0.52	-0.2
3,741,114	+		IAI47_17630	0.61	-0.3
3,741,114	+		IAI47_17630	0.61	-0.3
3,741,115	-		IAI47_17630	0.61	-0.6
3,741,159	+		IAI47_17630	0.64	-0.1
3,741,160	-		IAI47_17630	0.64	-1.1
3,741,230	-		IAI47_17630	0.69	-0.3
3,741,230	-		IAI47_17630	0.69	+0.8
3,741,239	-		IAI47_17630	0.70	+1.6
3,741,239	-		IAI47_17630	0.70	+0.7
3,741,247	+		IAI47_17630	0.71	-0.7
3,741,247	+		IAI47_17630	0.71	+0.5
3,741,247	+		IAI47_17630	0.71	+0.5
3,741,247	+		IAI47_17630	0.71	-0.5
3,741,247	+		IAI47_17630	0.71	-1.4
3,741,247	+		IAI47_17630	0.71	-0.0
3,741,247	+		IAI47_17630	0.71	+2.3
3,741,247	+		IAI47_17630	0.71	-1.9
3,741,247	+		IAI47_17630	0.71	+1.0
3,741,247	+		IAI47_17630	0.71	-2.9
3,741,248	-		IAI47_17630	0.71	-0.1
3,741,248	-		IAI47_17630	0.71	-1.5
3,741,248	-		IAI47_17630	0.71	+0.7
3,741,248	-		IAI47_17630	0.71	+0.1
3,741,248	-		IAI47_17630	0.71	-0.3
3,741,251	+		IAI47_17630	0.71	-0.6
3,741,251	+		IAI47_17630	0.71	+0.1
3,741,251	+		IAI47_17630	0.71	-1.7
3,741,251	+		IAI47_17630	0.71	+2.9
3,741,251	+		IAI47_17630	0.71	-0.2
3,741,293	+		IAI47_17630	0.74	-0.5
3,741,293	+		IAI47_17630	0.74	+3.0
3,741,293	+		IAI47_17630	0.74	+0.3
3,741,293	+		IAI47_17630	0.74	+1.2
3,741,294	-		IAI47_17630	0.74	+0.3
3,741,294	-		IAI47_17630	0.74	+0.6
3,741,294	-		IAI47_17630	0.74	-0.8
3,741,294	-		IAI47_17630	0.74	-0.8
3,741,294	-		IAI47_17630	0.74	+1.1
3,741,294	-		IAI47_17630	0.74	-0.5
3,741,318	+		IAI47_17630	0.76	+3.1
3,741,368	-		IAI47_17630	0.80	-0.1
3,741,396	+		IAI47_17630	0.82	+0.1
3,741,396	+		IAI47_17630	0.82	-0.9
3,741,418	+		IAI47_17630	0.84	+0.4
3,741,419	-		IAI47_17630	0.84	-0.1
3,741,452	+		IAI47_17630	0.86	-0.6
3,741,452	+		IAI47_17630	0.86	-0.0
3,741,452	+		IAI47_17630	0.86	-0.6
3,741,452	+		IAI47_17630	0.86	-0.6
3,741,452	+		IAI47_17630	0.86	-0.0
3,741,452	+		IAI47_17630	0.86	-0.6
3,741,452	+		IAI47_17630	0.86	-0.1
3,741,452	+		IAI47_17630	0.86	-0.7
3,741,452	+		IAI47_17630	0.86	+1.5
3,741,452	+		IAI47_17630	0.86	-1.2
3,741,452	+		IAI47_17630	0.86	-0.2
3,741,452	+		IAI47_17630	0.86	+1.1
3,741,453	-		IAI47_17630	0.86	+0.6
3,741,453	-		IAI47_17630	0.86	-0.2
3,741,453	-		IAI47_17630	0.86	+0.2
3,741,453	-		IAI47_17630	0.86	-0.8
3,741,453	-		IAI47_17630	0.86	-3.6
3,741,453	-		IAI47_17630	0.86	-0.2
3,741,453	-		IAI47_17630	0.86	+0.2
3,741,453	-		IAI47_17630	0.86	-0.8
3,741,494	+		IAI47_17630	0.89	-0.7
3,741,494	+		IAI47_17630	0.89	-0.5
3,741,494	+		IAI47_17630	0.89	-0.5
3,741,494	+		IAI47_17630	0.89	+0.3
3,741,494	+		IAI47_17630	0.89	-2.0
3,741,495	-		IAI47_17630	0.90	+0.1
3,741,495	-		IAI47_17630	0.90	+0.1
3,741,495	-		IAI47_17630	0.90	+0.4
3,741,495	-		IAI47_17630	0.90	-0.6
3,741,495	-		IAI47_17630	0.90	-0.4
3,741,495	-		IAI47_17630	0.90	+0.1
3,741,495	-		IAI47_17630	0.90	-0.3
3,741,495	-		IAI47_17630	0.90	-0.9
3,741,495	-		IAI47_17630	0.90	+0.4
3,741,495	-		IAI47_17630	0.90	+0.3
3,741,495	-		IAI47_17630	0.90	+0.6
3,741,495	-		IAI47_17630	0.90	-0.7
3,741,642	+				+2.1
3,741,642	+				-0.6
3,741,643	-				-0.2
3,741,643	-				-0.6
3,741,643	-				-0.4
3,741,652	+				+2.0
3,741,652	+				-0.8
3,741,654	+				-0.4
3,741,655	-				-1.2
3,741,655	-				-0.8
3,741,655	-				-0.0
3,741,655	-				-0.7
3,741,655	-				-2.4
3,741,656	+				-0.0
3,741,697	-				-0.6
3,741,966	+		IAI47_17635	0.23	+1.2
3,741,966	+		IAI47_17635	0.23	-1.4
3,741,977	+		IAI47_17635	0.24	-0.9
3,741,977	+		IAI47_17635	0.24	+0.1
3,741,995	+		IAI47_17635	0.25	+0.3
3,742,042	+		IAI47_17635	0.29	+0.2
3,742,042	+		IAI47_17635	0.29	-0.1
3,742,043	-		IAI47_17635	0.29	-0.1
3,742,083	+		IAI47_17635	0.32	-1.6
3,742,084	-		IAI47_17635	0.32	-0.7
3,742,084	-		IAI47_17635	0.32	-0.5
3,742,084	-		IAI47_17635	0.32	-0.3
3,742,084	-		IAI47_17635	0.32	-1.0
3,742,180	-		IAI47_17635	0.38	+1.1
3,742,200	+		IAI47_17635	0.40	+1.2
3,742,200	+		IAI47_17635	0.40	+0.8
3,742,201	-		IAI47_17635	0.40	+0.2
3,742,201	-		IAI47_17635	0.40	-0.7
3,742,275	+		IAI47_17635	0.45	-0.7
3,742,276	-		IAI47_17635	0.45	-1.4
3,742,302	+		IAI47_17635	0.47	-1.5
3,742,302	+		IAI47_17635	0.47	-0.8
3,742,302	+		IAI47_17635	0.47	+0.4
3,742,303	-		IAI47_17635	0.47	-0.1
3,742,327	+		IAI47_17635	0.48	-0.5
3,742,328	-		IAI47_17635	0.49	-1.2
3,742,342	-		IAI47_17635	0.49	-0.6
3,742,342	-		IAI47_17635	0.49	-0.2
3,742,390	+		IAI47_17635	0.53	+2.0
3,742,390	+		IAI47_17635	0.53	-0.4
3,742,390	+		IAI47_17635	0.53	-0.0
3,742,390	+		IAI47_17635	0.53	-1.2
3,742,391	-		IAI47_17635	0.53	-0.5
3,742,432	+		IAI47_17635	0.56	-0.6
3,742,432	+		IAI47_17635	0.56	+0.2
3,742,433	-		IAI47_17635	0.56	-0.0
3,742,433	-		IAI47_17635	0.56	+0.9
3,742,446	+		IAI47_17635	0.57	-0.5
3,742,446	+		IAI47_17635	0.57	+0.4
3,742,446	+		IAI47_17635	0.57	+0.2
3,742,447	-		IAI47_17635	0.57	+1.5
3,742,447	-		IAI47_17635	0.57	+0.3
3,742,447	-		IAI47_17635	0.57	-1.7
3,742,447	-		IAI47_17635	0.57	+0.7
3,742,447	-		IAI47_17635	0.57	+0.3
3,742,447	-		IAI47_17635	0.57	+0.0
3,742,519	+		IAI47_17635	0.62	-1.2
3,742,519	+		IAI47_17635	0.62	+0.3
3,742,519	+		IAI47_17635	0.62	+0.5
3,742,520	-		IAI47_17635	0.62	-0.7
3,742,520	-		IAI47_17635	0.62	-0.8
3,742,520	-		IAI47_17635	0.62	-0.7
3,742,520	-		IAI47_17635	0.62	+0.7
3,742,559	-		IAI47_17635	0.65	-0.1
3,742,559	-		IAI47_17635	0.65	-0.8
3,742,559	-		IAI47_17635	0.65	-0.0
3,742,585	+		IAI47_17635	0.66	+0.8
3,742,585	+		IAI47_17635	0.66	-0.6
3,742,586	-		IAI47_17635	0.66	-0.6