Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06554 and H281DRAFT_06555 are separated by 15 nucleotides H281DRAFT_06555 and H281DRAFT_06556 are separated by 211 nucleotides H281DRAFT_06556 and H281DRAFT_06557 are separated by 147 nucleotides H281DRAFT_06557 and H281DRAFT_06558 are separated by 78 nucleotides H281DRAFT_06558 and H281DRAFT_06559 overlap by 18 nucleotides H281DRAFT_06559 and H281DRAFT_06560 are separated by 85 nucleotides
H281DRAFT_06554: H281DRAFT_06554 - Transcriptional regulator, at 1 to 348
_06554
H281DRAFT_06555: H281DRAFT_06555 - hypothetical protein, at 364 to 546
_06555
H281DRAFT_06556: H281DRAFT_06556 - hypothetical protein, at 758 to 979
_06556
H281DRAFT_06557: H281DRAFT_06557 - hypothetical protein, at 1,127 to 1,321
_06557
H281DRAFT_06558: H281DRAFT_06558 - hypothetical protein, at 1,400 to 1,603
_06558
H281DRAFT_06559: H281DRAFT_06559 - hypothetical protein, at 1,586 to 1,891
_06559
H281DRAFT_06560: H281DRAFT_06560 - hypothetical protein, at 1,977 to 2,675
_06560
Position (kb) 0
1 Strain fitness (log2 ratio) -1
0
1 at 0.334 kb on + strand at 0.337 kb on + strand at 0.351 kb on + strand at 0.497 kb on + strand, within H281DRAFT_06555 at 0.498 kb on - strand, within H281DRAFT_06555 at 0.536 kb on + strand at 0.536 kb on + strand at 0.536 kb on + strand at 0.536 kb on + strand at 0.537 kb on - strand at 0.537 kb on - strand at 0.537 kb on - strand at 0.537 kb on - strand at 0.537 kb on - strand at 0.627 kb on + strand at 0.628 kb on - strand at 0.628 kb on - strand at 0.641 kb on + strand at 0.730 kb on + strand at 0.731 kb on - strand at 0.731 kb on - strand at 0.771 kb on - strand at 0.795 kb on - strand, within H281DRAFT_06556 at 0.834 kb on + strand, within H281DRAFT_06556 at 0.952 kb on - strand, within H281DRAFT_06556 at 1.014 kb on - strand at 1.043 kb on + strand at 1.060 kb on + strand at 1.256 kb on + strand, within H281DRAFT_06557 at 1.319 kb on + strand at 1.349 kb on - strand at 1.358 kb on + strand at 1.497 kb on + strand, within H281DRAFT_06558 at 1.497 kb on + strand, within H281DRAFT_06558 at 1.498 kb on - strand, within H281DRAFT_06558 at 1.524 kb on - strand, within H281DRAFT_06558 at 1.556 kb on + strand, within H281DRAFT_06558 at 1.557 kb on - strand, within H281DRAFT_06558 at 1.575 kb on + strand, within H281DRAFT_06558 at 1.575 kb on + strand, within H281DRAFT_06558 at 1.584 kb on + strand at 1.584 kb on + strand at 1.585 kb on - strand at 1.585 kb on - strand at 1.587 kb on + strand at 1.587 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 334 + +0.0 337 + -0.8 351 + -0.6 497 + H281DRAFT_06555 0.73 +0.1 498 - H281DRAFT_06555 0.73 -1.4 536 + +1.0 536 + -0.4 536 + +0.9 536 + +0.6 537 - +0.2 537 - +0.1 537 - +0.1 537 - -0.8 537 - -1.0 627 + +0.6 628 - -1.1 628 - -1.4 641 + +0.3 730 + +0.6 731 - +0.3 731 - +0.2 771 - -1.1 795 - H281DRAFT_06556 0.17 +0.4 834 + H281DRAFT_06556 0.34 +1.5 952 - H281DRAFT_06556 0.87 -0.1 1,014 - +0.1 1,043 + +0.2 1,060 + +0.0 1,256 + H281DRAFT_06557 0.66 +0.2 1,319 + +0.5 1,349 - -0.3 1,358 + +0.8 1,497 + H281DRAFT_06558 0.48 -0.1 1,497 + H281DRAFT_06558 0.48 -0.1 1,498 - H281DRAFT_06558 0.48 +0.4 1,524 - H281DRAFT_06558 0.61 +1.1 1,556 + H281DRAFT_06558 0.76 +0.4 1,557 - H281DRAFT_06558 0.77 -0.0 1,575 + H281DRAFT_06558 0.86 +0.0 1,575 + H281DRAFT_06558 0.86 -0.6 1,584 + +0.4 1,584 + +0.1 1,585 - -0.1 1,585 - -0.2 1,587 + -0.4 1,587 + -0.6
Or see this region's nucleotide sequence