Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05892 and H281DRAFT_05893 are separated by 113 nucleotides H281DRAFT_05893 and H281DRAFT_05894 are separated by 224 nucleotides H281DRAFT_05894 and H281DRAFT_05895 overlap by 4 nucleotides
H281DRAFT_05892: H281DRAFT_05892 - carbohydrate ABC transporter substrate-binding protein, CUT1 family, at 29,387 to 30,718
_05892
H281DRAFT_05893: H281DRAFT_05893 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 30,832 to 31,851
_05893
H281DRAFT_05894: H281DRAFT_05894 - hypothetical protein, at 32,076 to 32,252
_05894
H281DRAFT_05895: H281DRAFT_05895 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 32,249 to 33,082
_05895
Position (kb) 30
31
32 Strain fitness (log2 ratio) -2
-1
0
1 at 30.030 kb on + strand, within H281DRAFT_05892 at 30.048 kb on + strand, within H281DRAFT_05892 at 30.617 kb on + strand at 30.693 kb on - strand at 30.786 kb on + strand at 30.992 kb on - strand, within H281DRAFT_05893 at 31.559 kb on + strand, within H281DRAFT_05893 at 31.837 kb on - strand at 31.888 kb on + strand at 32.002 kb on + strand at 32.006 kb on - strand at 32.838 kb on + strand, within H281DRAFT_05895
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 30,030 + H281DRAFT_05892 0.48 +1.4 30,048 + H281DRAFT_05892 0.50 -1.5 30,617 + +0.2 30,693 - +0.3 30,786 + -0.1 30,992 - H281DRAFT_05893 0.16 -0.4 31,559 + H281DRAFT_05893 0.71 +1.5 31,837 - -0.1 31,888 + -0.3 32,002 + -0.2 32,006 - -2.4 32,838 + H281DRAFT_05895 0.71 -1.3
Or see this region's nucleotide sequence