Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05536 and H281DRAFT_05537 overlap by 4 nucleotides H281DRAFT_05537 and H281DRAFT_05538 are separated by 515 nucleotides
H281DRAFT_05536: H281DRAFT_05536 - hypothetical protein, at 120,558 to 122,282
_05536
H281DRAFT_05537: H281DRAFT_05537 - transcriptional regulator, IclR family, at 122,279 to 123,001
_05537
H281DRAFT_05538: H281DRAFT_05538 - D-galactarolactone isomerase, at 123,517 to 124,347
_05538
Position (kb) 122
123
124 Strain fitness (log2 ratio) -2
-1
0
1
2 at 121.293 kb on + strand, within H281DRAFT_05536 at 121.753 kb on + strand, within H281DRAFT_05536 at 121.754 kb on - strand, within H281DRAFT_05536 at 122.562 kb on + strand, within H281DRAFT_05537 at 123.001 kb on + strand at 123.002 kb on - strand at 123.053 kb on - strand at 123.059 kb on + strand at 123.060 kb on - strand at 123.060 kb on - strand at 123.241 kb on - strand at 123.295 kb on - strand at 123.297 kb on + strand at 123.374 kb on + strand at 123.375 kb on - strand at 123.375 kb on - strand at 123.375 kb on - strand at 123.387 kb on - strand at 123.387 kb on - strand at 123.440 kb on - strand at 123.528 kb on - strand at 123.596 kb on - strand at 123.596 kb on - strand at 123.662 kb on - strand, within H281DRAFT_05538 at 123.679 kb on - strand, within H281DRAFT_05538 at 123.685 kb on + strand, within H281DRAFT_05538 at 123.685 kb on + strand, within H281DRAFT_05538 at 123.685 kb on + strand, within H281DRAFT_05538 at 123.686 kb on - strand, within H281DRAFT_05538 at 123.995 kb on - strand, within H281DRAFT_05538 at 123.995 kb on - strand, within H281DRAFT_05538
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 121,293 + H281DRAFT_05536 0.43 +0.1 121,753 + H281DRAFT_05536 0.69 -1.7 121,754 - H281DRAFT_05536 0.69 +0.2 122,562 + H281DRAFT_05537 0.39 +0.7 123,001 + +2.0 123,002 - +0.3 123,053 - -0.6 123,059 + +1.4 123,060 - -0.4 123,060 - +1.3 123,241 - -0.3 123,295 - +0.4 123,297 + -0.9 123,374 + +1.5 123,375 - +1.4 123,375 - +0.8 123,375 - +0.1 123,387 - +0.4 123,387 - -2.0 123,440 - +0.8 123,528 - +0.3 123,596 - +0.5 123,596 - +0.7 123,662 - H281DRAFT_05538 0.17 +0.2 123,679 - H281DRAFT_05538 0.19 -0.9 123,685 + H281DRAFT_05538 0.20 -0.3 123,685 + H281DRAFT_05538 0.20 +0.6 123,685 + H281DRAFT_05538 0.20 +0.4 123,686 - H281DRAFT_05538 0.20 -0.3 123,995 - H281DRAFT_05538 0.58 +0.2 123,995 - H281DRAFT_05538 0.58 -0.2
Or see this region's nucleotide sequence