Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04956 and H281DRAFT_04957 are separated by 183 nucleotides H281DRAFT_04957 and H281DRAFT_04958 are separated by 148 nucleotides H281DRAFT_04958 and H281DRAFT_04959 are separated by 219 nucleotides H281DRAFT_04959 and H281DRAFT_04960 are separated by 290 nucleotides
H281DRAFT_04956: H281DRAFT_04956 - fumarase, class I, homodimeric, at 141,852 to 143,375
_04956
H281DRAFT_04957: H281DRAFT_04957 - bacterioferritin, at 143,559 to 144,038
_04957
H281DRAFT_04958: H281DRAFT_04958 - glutamate racemase, at 144,187 to 145,071
_04958
H281DRAFT_04959: H281DRAFT_04959 - bacterioferritin-associated ferredoxin, at 145,291 to 145,527
_04959
H281DRAFT_04960: H281DRAFT_04960 - outer membrane transport energization protein TonB (TC 2.C.1.1.1), at 145,818 to 146,552
_04960
Position (kb) 144
145
146 Strain fitness (log2 ratio) -1
0
1 at 143.393 kb on + strand at 143.394 kb on - strand at 143.587 kb on - strand at 143.631 kb on + strand, within H281DRAFT_04957 at 143.652 kb on + strand, within H281DRAFT_04957 at 143.652 kb on + strand, within H281DRAFT_04957 at 143.653 kb on - strand, within H281DRAFT_04957 at 143.654 kb on + strand, within H281DRAFT_04957 at 144.003 kb on + strand at 144.003 kb on + strand at 144.095 kb on - strand at 144.124 kb on + strand at 144.125 kb on - strand at 144.125 kb on - strand at 144.335 kb on - strand, within H281DRAFT_04958 at 144.460 kb on - strand, within H281DRAFT_04958 at 144.631 kb on + strand, within H281DRAFT_04958 at 144.736 kb on + strand, within H281DRAFT_04958 at 144.949 kb on + strand, within H281DRAFT_04958 at 144.950 kb on - strand, within H281DRAFT_04958 at 145.160 kb on + strand at 145.190 kb on + strand at 145.191 kb on - strand at 145.277 kb on + strand at 145.742 kb on + strand at 145.742 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 143,393 + +0.2 143,394 - -0.3 143,587 - +0.6 143,631 + H281DRAFT_04957 0.15 +0.4 143,652 + H281DRAFT_04957 0.19 -1.0 143,652 + H281DRAFT_04957 0.19 -0.9 143,653 - H281DRAFT_04957 0.20 +0.3 143,654 + H281DRAFT_04957 0.20 -0.3 144,003 + -0.1 144,003 + +0.6 144,095 - -0.3 144,124 + +0.8 144,125 - +0.2 144,125 - +1.6 144,335 - H281DRAFT_04958 0.17 +1.1 144,460 - H281DRAFT_04958 0.31 +0.3 144,631 + H281DRAFT_04958 0.50 -1.3 144,736 + H281DRAFT_04958 0.62 +1.0 144,949 + H281DRAFT_04958 0.86 +1.4 144,950 - H281DRAFT_04958 0.86 +0.6 145,160 + +0.4 145,190 + -0.7 145,191 - +0.2 145,277 + -0.1 145,742 + +0.1 145,742 + +0.5
Or see this region's nucleotide sequence