Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04946 and H281DRAFT_04947 are separated by 1 nucleotides H281DRAFT_04947 and H281DRAFT_04948 are separated by 37 nucleotides
H281DRAFT_04946: H281DRAFT_04946 - putative spermidine/putrescine transport system ATP-binding protein, at 130,293 to 131,474
_04946
H281DRAFT_04947: H281DRAFT_04947 - putative spermidine/putrescine transport system substrate-binding protein, at 131,476 to 132,522
_04947
H281DRAFT_04948: H281DRAFT_04948 - putative spermidine/putrescine transport system permease protein, at 132,560 to 133,813
_04948
Position (kb) 131
132
133 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 131.206 kb on + strand, within H281DRAFT_04946 at 131.235 kb on + strand, within H281DRAFT_04946 at 131.258 kb on - strand, within H281DRAFT_04946 at 131.875 kb on + strand, within H281DRAFT_04947 at 131.875 kb on + strand at 132.167 kb on - strand, within H281DRAFT_04947 at 132.329 kb on - strand, within H281DRAFT_04947 at 132.346 kb on + strand, within H281DRAFT_04947 at 132.521 kb on - strand at 132.553 kb on + strand at 133.068 kb on - strand, within H281DRAFT_04948 at 133.322 kb on + strand, within H281DRAFT_04948 at 133.355 kb on - strand, within H281DRAFT_04948 at 133.452 kb on - strand, within H281DRAFT_04948
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 131,206 + H281DRAFT_04946 0.77 -1.0 131,235 + H281DRAFT_04946 0.80 +0.2 131,258 - H281DRAFT_04946 0.82 +0.0 131,875 + H281DRAFT_04947 0.38 +0.9 131,875 + -0.1 132,167 - H281DRAFT_04947 0.66 +0.2 132,329 - H281DRAFT_04947 0.81 +1.9 132,346 + H281DRAFT_04947 0.83 +0.7 132,521 - +0.1 132,553 + -3.1 133,068 - H281DRAFT_04948 0.41 +0.7 133,322 + H281DRAFT_04948 0.61 +0.8 133,355 - H281DRAFT_04948 0.63 -0.1 133,452 - H281DRAFT_04948 0.71 +0.6
Or see this region's nucleotide sequence