Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03319 and H281DRAFT_03320 are separated by 180 nucleotides H281DRAFT_03320 and H281DRAFT_03321 are separated by 57 nucleotides H281DRAFT_03321 and H281DRAFT_03322 are separated by 164 nucleotides H281DRAFT_03322 and H281DRAFT_03323 are separated by 54 nucleotides
H281DRAFT_03319: H281DRAFT_03319 - Predicted outer membrane protein, at 381,514 to 382,056
_03319
H281DRAFT_03320: H281DRAFT_03320 - Uncharacterized conserved protein, at 382,237 to 382,665
_03320
H281DRAFT_03321: H281DRAFT_03321 - hypothetical protein, at 382,723 to 382,848
_03321
H281DRAFT_03322: H281DRAFT_03322 - hypothetical protein, at 383,013 to 383,306
_03322
H281DRAFT_03323: H281DRAFT_03323 - hypothetical protein, at 383,361 to 383,996
_03323
Position (kb) 382
383 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 381.406 kb on - strand at 381.880 kb on + strand, within H281DRAFT_03319 at 381.881 kb on - strand, within H281DRAFT_03319 at 381.882 kb on + strand, within H281DRAFT_03319 at 382.009 kb on + strand at 382.057 kb on + strand at 382.058 kb on - strand at 382.223 kb on - strand at 382.517 kb on - strand, within H281DRAFT_03320 at 382.592 kb on + strand, within H281DRAFT_03320 at 382.698 kb on + strand at 382.698 kb on + strand at 383.124 kb on - strand, within H281DRAFT_03322 at 383.213 kb on - strand, within H281DRAFT_03322
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 381,406 - +0.7 381,880 + H281DRAFT_03319 0.67 -2.8 381,881 - H281DRAFT_03319 0.68 -0.2 381,882 + H281DRAFT_03319 0.68 +0.1 382,009 + +0.0 382,057 + +1.0 382,058 - -0.1 382,223 - +1.3 382,517 - H281DRAFT_03320 0.65 +0.6 382,592 + H281DRAFT_03320 0.83 +0.8 382,698 + -0.1 382,698 + -0.6 383,124 - H281DRAFT_03322 0.38 -0.4 383,213 - H281DRAFT_03322 0.68 -0.0
Or see this region's nucleotide sequence