Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03183 and H281DRAFT_03184 are separated by 157 nucleotides H281DRAFT_03184 and H281DRAFT_03185 are separated by 156 nucleotides
H281DRAFT_03183: H281DRAFT_03183 - glutamate dehydrogenase (NAD), at 224,267 to 229,120
_03183
H281DRAFT_03184: H281DRAFT_03184 - cation diffusion facilitator family transporter, at 229,278 to 230,183
_03184
H281DRAFT_03185: H281DRAFT_03185 - Purine nucleoside permease, at 230,340 to 231,413
_03185
Position (kb) 229
230
231 Strain fitness (log2 ratio) -1
0
1
2 at 228.685 kb on + strand at 229.182 kb on - strand at 229.262 kb on - strand at 229.304 kb on + strand at 229.611 kb on + strand, within H281DRAFT_03184 at 230.214 kb on - strand at 230.231 kb on - strand at 230.250 kb on + strand at 230.250 kb on + strand at 230.357 kb on + strand at 230.399 kb on + strand at 230.487 kb on - strand, within H281DRAFT_03185 at 230.525 kb on + strand, within H281DRAFT_03185 at 230.525 kb on + strand, within H281DRAFT_03185 at 230.575 kb on - strand, within H281DRAFT_03185 at 230.605 kb on + strand, within H281DRAFT_03185 at 230.605 kb on + strand, within H281DRAFT_03185 at 230.606 kb on - strand, within H281DRAFT_03185 at 230.912 kb on + strand, within H281DRAFT_03185 at 230.998 kb on - strand, within H281DRAFT_03185 at 231.059 kb on + strand, within H281DRAFT_03185 at 231.168 kb on + strand, within H281DRAFT_03185 at 231.169 kb on - strand, within H281DRAFT_03185
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 228,685 + +0.5 229,182 - +0.6 229,262 - +1.1 229,304 + -1.2 229,611 + H281DRAFT_03184 0.37 +0.7 230,214 - +1.9 230,231 - +0.2 230,250 + -0.2 230,250 + +0.9 230,357 + +0.0 230,399 + +1.2 230,487 - H281DRAFT_03185 0.14 -1.1 230,525 + H281DRAFT_03185 0.17 -1.7 230,525 + H281DRAFT_03185 0.17 -0.6 230,575 - H281DRAFT_03185 0.22 +0.2 230,605 + H281DRAFT_03185 0.25 -0.2 230,605 + H281DRAFT_03185 0.25 +0.4 230,606 - H281DRAFT_03185 0.25 +0.6 230,912 + H281DRAFT_03185 0.53 +0.4 230,998 - H281DRAFT_03185 0.61 -0.0 231,059 + H281DRAFT_03185 0.67 +1.2 231,168 + H281DRAFT_03185 0.77 +0.3 231,169 - H281DRAFT_03185 0.77 +0.5
Or see this region's nucleotide sequence