Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02514 and H281DRAFT_02515 are separated by 30 nucleotides H281DRAFT_02515 and H281DRAFT_02516 are separated by 63 nucleotides H281DRAFT_02516 and H281DRAFT_02517 are separated by 227 nucleotides
H281DRAFT_02514: H281DRAFT_02514 - enoyl-CoA hydratase, at 90,506 to 91,282
_02514
H281DRAFT_02515: H281DRAFT_02515 - short chain enoyl-CoA hydratase (EC 4.2.1.17)/Enoyl-CoA hydratase (EC 4.2.1.17), at 91,313 to 92,134
_02515
H281DRAFT_02516: H281DRAFT_02516 - Nitrate/nitrite transporter NarK, at 92,198 to 93,571
_02516
H281DRAFT_02517: H281DRAFT_02517 - Acetyltransferase (GNAT) domain-containing protein, at 93,799 to 94,620
_02517
Position (kb) 92
93
94 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 92.056 kb on - strand at 92.172 kb on + strand at 92.283 kb on - strand at 92.301 kb on - strand at 92.301 kb on - strand at 92.397 kb on - strand, within H281DRAFT_02516 at 92.400 kb on + strand, within H281DRAFT_02516 at 92.401 kb on - strand, within H281DRAFT_02516 at 92.401 kb on - strand, within H281DRAFT_02516 at 92.621 kb on + strand, within H281DRAFT_02516 at 92.979 kb on - strand, within H281DRAFT_02516 at 92.980 kb on + strand, within H281DRAFT_02516 at 92.993 kb on + strand, within H281DRAFT_02516 at 92.993 kb on + strand, within H281DRAFT_02516 at 92.993 kb on + strand, within H281DRAFT_02516 at 92.994 kb on - strand, within H281DRAFT_02516 at 92.995 kb on + strand, within H281DRAFT_02516 at 92.995 kb on + strand, within H281DRAFT_02516 at 92.996 kb on - strand, within H281DRAFT_02516 at 92.996 kb on - strand, within H281DRAFT_02516 at 93.002 kb on + strand, within H281DRAFT_02516 at 93.065 kb on - strand, within H281DRAFT_02516 at 93.434 kb on + strand at 93.473 kb on + strand at 93.474 kb on - strand at 93.558 kb on + strand at 93.697 kb on - strand at 93.840 kb on + strand at 93.892 kb on + strand, within H281DRAFT_02517 at 93.893 kb on - strand, within H281DRAFT_02517 at 93.893 kb on - strand, within H281DRAFT_02517 at 93.893 kb on - strand, within H281DRAFT_02517 at 93.895 kb on - strand, within H281DRAFT_02517 at 94.045 kb on - strand, within H281DRAFT_02517 at 94.191 kb on + strand, within H281DRAFT_02517 at 94.260 kb on + strand, within H281DRAFT_02517 at 94.273 kb on + strand, within H281DRAFT_02517 at 94.273 kb on + strand, within H281DRAFT_02517 at 94.273 kb on + strand, within H281DRAFT_02517 at 94.273 kb on + strand, within H281DRAFT_02517 at 94.273 kb on + strand, within H281DRAFT_02517 at 94.273 kb on + strand, within H281DRAFT_02517 at 94.274 kb on - strand, within H281DRAFT_02517 at 94.297 kb on + strand, within H281DRAFT_02517 at 94.298 kb on - strand, within H281DRAFT_02517 at 94.361 kb on + strand, within H281DRAFT_02517 at 94.361 kb on + strand, within H281DRAFT_02517 at 94.361 kb on + strand, within H281DRAFT_02517 at 94.413 kb on + strand, within H281DRAFT_02517 at 94.414 kb on - strand, within H281DRAFT_02517 at 94.416 kb on + strand, within H281DRAFT_02517 at 94.541 kb on + strand at 94.544 kb on - strand at 94.544 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 92,056 - -0.4 92,172 + +1.3 92,283 - -3.6 92,301 - -0.6 92,301 - -1.2 92,397 - H281DRAFT_02516 0.14 -0.2 92,400 + H281DRAFT_02516 0.15 +0.0 92,401 - H281DRAFT_02516 0.15 -1.4 92,401 - H281DRAFT_02516 0.15 +0.0 92,621 + H281DRAFT_02516 0.31 +0.1 92,979 - H281DRAFT_02516 0.57 +0.4 92,980 + H281DRAFT_02516 0.57 -0.4 92,993 + H281DRAFT_02516 0.58 +0.5 92,993 + H281DRAFT_02516 0.58 -0.3 92,993 + H281DRAFT_02516 0.58 -0.3 92,994 - H281DRAFT_02516 0.58 +0.1 92,995 + H281DRAFT_02516 0.58 -2.4 92,995 + H281DRAFT_02516 0.58 +1.4 92,996 - H281DRAFT_02516 0.58 -0.2 92,996 - H281DRAFT_02516 0.58 -0.2 93,002 + H281DRAFT_02516 0.59 +0.6 93,065 - H281DRAFT_02516 0.63 -0.3 93,434 + +0.1 93,473 + +0.3 93,474 - +0.0 93,558 + +0.4 93,697 - +0.3 93,840 + +0.5 93,892 + H281DRAFT_02517 0.11 -0.5 93,893 - H281DRAFT_02517 0.11 +1.3 93,893 - H281DRAFT_02517 0.11 +0.4 93,893 - H281DRAFT_02517 0.11 -0.1 93,895 - H281DRAFT_02517 0.12 +0.2 94,045 - H281DRAFT_02517 0.30 -0.9 94,191 + H281DRAFT_02517 0.48 +0.3 94,260 + H281DRAFT_02517 0.56 -0.5 94,273 + H281DRAFT_02517 0.58 +0.0 94,273 + H281DRAFT_02517 0.58 +0.3 94,273 + H281DRAFT_02517 0.58 -0.0 94,273 + H281DRAFT_02517 0.58 -0.5 94,273 + H281DRAFT_02517 0.58 +0.4 94,273 + H281DRAFT_02517 0.58 -0.4 94,274 - H281DRAFT_02517 0.58 +1.9 94,297 + H281DRAFT_02517 0.61 -0.4 94,298 - H281DRAFT_02517 0.61 +0.9 94,361 + H281DRAFT_02517 0.68 -0.7 94,361 + H281DRAFT_02517 0.68 +0.5 94,361 + H281DRAFT_02517 0.68 +0.9 94,413 + H281DRAFT_02517 0.75 -0.7 94,414 - H281DRAFT_02517 0.75 +1.0 94,416 + H281DRAFT_02517 0.75 +0.3 94,541 + +0.3 94,544 - +0.3 94,544 - +0.2
Or see this region's nucleotide sequence