Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02507 and H281DRAFT_02508 are separated by 41 nucleotides H281DRAFT_02508 and H281DRAFT_02509 are separated by 101 nucleotides H281DRAFT_02509 and H281DRAFT_02510 are separated by 115 nucleotides
H281DRAFT_02507: H281DRAFT_02507 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 83,348 to 84,115
_02507
H281DRAFT_02508: H281DRAFT_02508 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 84,157 to 84,891
_02508
H281DRAFT_02509: H281DRAFT_02509 - DNA-binding transcriptional regulator, LysR family, at 84,993 to 85,958
_02509
H281DRAFT_02510: H281DRAFT_02510 - Short-chain dehydrogenase, at 86,074 to 86,901
_02510
Position (kb) 84
85
86 Strain fitness (log2 ratio) -1
0
1 at 84.003 kb on + strand, within H281DRAFT_02507 at 84.641 kb on - strand, within H281DRAFT_02508 at 84.681 kb on - strand, within H281DRAFT_02508 at 84.928 kb on + strand at 84.928 kb on + strand at 85.078 kb on + strand at 85.302 kb on + strand, within H281DRAFT_02509 at 85.421 kb on + strand, within H281DRAFT_02509 at 85.422 kb on - strand, within H281DRAFT_02509 at 86.162 kb on + strand, within H281DRAFT_02510 at 86.749 kb on - strand, within H281DRAFT_02510 at 86.881 kb on - strand at 86.949 kb on + strand at 86.950 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 84,003 + H281DRAFT_02507 0.85 +1.3 84,641 - H281DRAFT_02508 0.66 -0.1 84,681 - H281DRAFT_02508 0.71 +0.7 84,928 + +0.4 84,928 + +0.2 85,078 + -0.2 85,302 + H281DRAFT_02509 0.32 +0.4 85,421 + H281DRAFT_02509 0.44 +0.7 85,422 - H281DRAFT_02509 0.44 +0.7 86,162 + H281DRAFT_02510 0.11 +0.3 86,749 - H281DRAFT_02510 0.82 -0.2 86,881 - +0.3 86,949 + +1.2 86,950 - -0.6
Or see this region's nucleotide sequence