Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01994 and H281DRAFT_01995 are separated by 73 nucleotides H281DRAFT_01995 and H281DRAFT_01996 are separated by 326 nucleotides
H281DRAFT_01994: H281DRAFT_01994 - cytochrome c oxidase subunit 2, at 112,384 to 114,018
_01994
H281DRAFT_01995: H281DRAFT_01995 - Uncharacterized membrane protein, at 114,092 to 114,565
_01995
H281DRAFT_01996: H281DRAFT_01996 - malonyl-CoA O-methyltransferase, at 114,892 to 115,857
_01996
Position (kb)
114
115 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 113.105 kb on + strand, within H281DRAFT_01994 at 113.105 kb on + strand, within H281DRAFT_01994 at 113.105 kb on + strand, within H281DRAFT_01994 at 113.106 kb on - strand, within H281DRAFT_01994 at 113.142 kb on + strand, within H281DRAFT_01994 at 113.142 kb on + strand, within H281DRAFT_01994 at 113.142 kb on + strand, within H281DRAFT_01994 at 113.143 kb on - strand, within H281DRAFT_01994 at 113.143 kb on - strand, within H281DRAFT_01994 at 113.143 kb on - strand, within H281DRAFT_01994 at 113.144 kb on + strand, within H281DRAFT_01994 at 113.145 kb on - strand, within H281DRAFT_01994 at 113.375 kb on + strand, within H281DRAFT_01994 at 113.376 kb on - strand, within H281DRAFT_01994 at 113.465 kb on + strand, within H281DRAFT_01994 at 113.465 kb on + strand, within H281DRAFT_01994 at 113.465 kb on + strand, within H281DRAFT_01994 at 113.466 kb on - strand, within H281DRAFT_01994 at 113.466 kb on - strand, within H281DRAFT_01994 at 113.466 kb on - strand, within H281DRAFT_01994 at 113.466 kb on - strand, within H281DRAFT_01994 at 113.469 kb on + strand, within H281DRAFT_01994 at 113.469 kb on + strand, within H281DRAFT_01994 at 113.558 kb on + strand, within H281DRAFT_01994 at 113.558 kb on + strand, within H281DRAFT_01994 at 113.558 kb on + strand, within H281DRAFT_01994 at 113.559 kb on - strand, within H281DRAFT_01994 at 113.772 kb on - strand, within H281DRAFT_01994 at 113.840 kb on + strand, within H281DRAFT_01994 at 113.840 kb on + strand, within H281DRAFT_01994 at 113.841 kb on - strand, within H281DRAFT_01994 at 113.994 kb on + strand at 113.995 kb on - strand at 114.112 kb on + strand at 114.113 kb on - strand at 114.113 kb on - strand at 114.113 kb on - strand at 114.291 kb on - strand, within H281DRAFT_01995 at 114.291 kb on - strand, within H281DRAFT_01995 at 114.291 kb on - strand, within H281DRAFT_01995 at 114.345 kb on + strand, within H281DRAFT_01995 at 114.345 kb on + strand, within H281DRAFT_01995 at 114.345 kb on + strand, within H281DRAFT_01995 at 114.345 kb on + strand, within H281DRAFT_01995 at 114.346 kb on - strand, within H281DRAFT_01995 at 114.346 kb on - strand, within H281DRAFT_01995 at 114.346 kb on - strand, within H281DRAFT_01995 at 114.346 kb on - strand, within H281DRAFT_01995 at 114.346 kb on - strand, within H281DRAFT_01995 at 114.346 kb on - strand, within H281DRAFT_01995 at 114.465 kb on + strand, within H281DRAFT_01995 at 114.465 kb on + strand, within H281DRAFT_01995 at 114.465 kb on + strand, within H281DRAFT_01995 at 114.465 kb on + strand, within H281DRAFT_01995 at 114.466 kb on - strand, within H281DRAFT_01995 at 114.466 kb on - strand, within H281DRAFT_01995 at 114.466 kb on - strand, within H281DRAFT_01995 at 114.466 kb on - strand, within H281DRAFT_01995 at 114.466 kb on - strand, within H281DRAFT_01995 at 114.466 kb on - strand, within H281DRAFT_01995 at 114.648 kb on - strand at 114.751 kb on - strand at 114.869 kb on + strand at 114.869 kb on + strand at 114.870 kb on - strand at 114.870 kb on - strand at 114.870 kb on - strand at 114.870 kb on - strand at 114.885 kb on + strand at 114.886 kb on - strand at 114.886 kb on - strand at 114.886 kb on - strand at 114.886 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 113,105 + H281DRAFT_01994 0.44 -1.0 113,105 + H281DRAFT_01994 0.44 -0.8 113,105 + H281DRAFT_01994 0.44 -1.8 113,106 - H281DRAFT_01994 0.44 +0.7 113,142 + H281DRAFT_01994 0.46 -0.8 113,142 + H281DRAFT_01994 0.46 +0.0 113,142 + H281DRAFT_01994 0.46 -0.3 113,143 - H281DRAFT_01994 0.46 -0.2 113,143 - H281DRAFT_01994 0.46 -0.7 113,143 - H281DRAFT_01994 0.46 -0.3 113,144 + H281DRAFT_01994 0.46 -0.7 113,145 - H281DRAFT_01994 0.47 -0.2 113,375 + H281DRAFT_01994 0.61 -2.8 113,376 - H281DRAFT_01994 0.61 -0.2 113,465 + H281DRAFT_01994 0.66 -1.3 113,465 + H281DRAFT_01994 0.66 -4.3 113,465 + H281DRAFT_01994 0.66 -2.1 113,466 - H281DRAFT_01994 0.66 -2.1 113,466 - H281DRAFT_01994 0.66 -3.8 113,466 - H281DRAFT_01994 0.66 -1.3 113,466 - H281DRAFT_01994 0.66 -2.9 113,469 + H281DRAFT_01994 0.66 -2.2 113,469 + H281DRAFT_01994 0.66 -2.1 113,558 + H281DRAFT_01994 0.72 -1.0 113,558 + H281DRAFT_01994 0.72 -0.8 113,558 + H281DRAFT_01994 0.72 -2.0 113,559 - H281DRAFT_01994 0.72 -3.5 113,772 - H281DRAFT_01994 0.85 -2.7 113,840 + H281DRAFT_01994 0.89 -2.1 113,840 + H281DRAFT_01994 0.89 +0.3 113,841 - H281DRAFT_01994 0.89 -2.5 113,994 + -1.6 113,995 - +0.1 114,112 + +2.2 114,113 - +0.8 114,113 - -0.3 114,113 - -0.1 114,291 - H281DRAFT_01995 0.42 +0.3 114,291 - H281DRAFT_01995 0.42 -0.5 114,291 - H281DRAFT_01995 0.42 +0.0 114,345 + H281DRAFT_01995 0.53 -3.2 114,345 + H281DRAFT_01995 0.53 -3.4 114,345 + H281DRAFT_01995 0.53 +0.4 114,345 + H281DRAFT_01995 0.53 -1.8 114,346 - H281DRAFT_01995 0.54 -0.5 114,346 - H281DRAFT_01995 0.54 +0.2 114,346 - H281DRAFT_01995 0.54 -1.8 114,346 - H281DRAFT_01995 0.54 -0.6 114,346 - H281DRAFT_01995 0.54 -0.4 114,346 - H281DRAFT_01995 0.54 +0.5 114,465 + H281DRAFT_01995 0.79 -1.2 114,465 + H281DRAFT_01995 0.79 -1.2 114,465 + H281DRAFT_01995 0.79 -2.9 114,465 + H281DRAFT_01995 0.79 +0.1 114,466 - H281DRAFT_01995 0.79 +1.3 114,466 - H281DRAFT_01995 0.79 +0.5 114,466 - H281DRAFT_01995 0.79 +0.3 114,466 - H281DRAFT_01995 0.79 -0.0 114,466 - H281DRAFT_01995 0.79 -1.6 114,466 - H281DRAFT_01995 0.79 -1.7 114,648 - -0.4 114,751 - +0.8 114,869 + +0.4 114,869 + -1.9 114,870 - +0.5 114,870 - +0.2 114,870 - +0.1 114,870 - +0.2 114,885 + +1.2 114,886 - +2.8 114,886 - -0.9 114,886 - -1.0 114,886 - +1.0
Or see this region's nucleotide sequence