Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01658 and H281DRAFT_01659 are separated by 16 nucleotides H281DRAFT_01659 and H281DRAFT_01660 are separated by 87 nucleotides H281DRAFT_01660 and H281DRAFT_01661 are separated by 303 nucleotides
H281DRAFT_01658: H281DRAFT_01658 - amidase, at 538,676 to 539,818
_01658
H281DRAFT_01659: H281DRAFT_01659 - 3-oxoacyl-[acyl-carrier protein] reductase, at 539,835 to 540,578
_01659
H281DRAFT_01660: H281DRAFT_01660 - 4-hydroxyphenylacetate 3-monooxygenase reductase component (EC 1.14.13.3), at 540,666 to 541,211
_01660
H281DRAFT_01661: H281DRAFT_01661 - DNA-binding transcriptional regulator, LysR family, at 541,515 to 542,420
_01661
Position (kb) 539
540
541 Strain fitness (log2 ratio) -1
0
1
2 at 538.883 kb on - strand, within H281DRAFT_01658 at 538.883 kb on - strand, within H281DRAFT_01658 at 538.960 kb on + strand, within H281DRAFT_01658 at 539.354 kb on + strand, within H281DRAFT_01658 at 539.690 kb on - strand, within H281DRAFT_01658 at 540.155 kb on - strand, within H281DRAFT_01659 at 540.291 kb on + strand, within H281DRAFT_01659 at 540.604 kb on - strand at 540.901 kb on + strand, within H281DRAFT_01660 at 540.901 kb on + strand, within H281DRAFT_01660 at 540.902 kb on - strand, within H281DRAFT_01660 at 540.902 kb on - strand, within H281DRAFT_01660 at 540.902 kb on - strand, within H281DRAFT_01660 at 541.152 kb on + strand, within H281DRAFT_01660 at 541.554 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 538,883 - H281DRAFT_01658 0.18 -0.2 538,883 - H281DRAFT_01658 0.18 -0.2 538,960 + H281DRAFT_01658 0.25 -0.0 539,354 + H281DRAFT_01658 0.59 -1.0 539,690 - H281DRAFT_01658 0.89 -1.4 540,155 - H281DRAFT_01659 0.43 -0.2 540,291 + H281DRAFT_01659 0.61 +0.7 540,604 - -1.5 540,901 + H281DRAFT_01660 0.43 -1.1 540,901 + H281DRAFT_01660 0.43 +2.4 540,902 - H281DRAFT_01660 0.43 +0.4 540,902 - H281DRAFT_01660 0.43 -0.2 540,902 - H281DRAFT_01660 0.43 -0.3 541,152 + H281DRAFT_01660 0.89 -0.9 541,554 + +0.5
Or see this region's nucleotide sequence