Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01501 and H281DRAFT_01502 are separated by 516 nucleotides H281DRAFT_01502 and H281DRAFT_01503 are separated by 116 nucleotides H281DRAFT_01503 and H281DRAFT_01504 are separated by 236 nucleotides
H281DRAFT_01501: H281DRAFT_01501 - hypothetical protein, at 370,705 to 371,823
_01501
H281DRAFT_01502: H281DRAFT_01502 - Protein of unknown function (DUF2917), at 372,340 to 372,717
_01502
H281DRAFT_01503: H281DRAFT_01503 - hypothetical protein, at 372,834 to 373,430
_01503
H281DRAFT_01504: H281DRAFT_01504 - 3-oxoadipyl-CoA thiolase, at 373,667 to 374,869
_01504
Position (kb) 372
373 Strain fitness (log2 ratio) -1
0
1 at 371.368 kb on + strand, within H281DRAFT_01501 at 371.369 kb on - strand, within H281DRAFT_01501 at 371.369 kb on - strand, within H281DRAFT_01501 at 371.564 kb on + strand, within H281DRAFT_01501 at 371.564 kb on + strand, within H281DRAFT_01501 at 371.634 kb on - strand, within H281DRAFT_01501 at 371.652 kb on - strand, within H281DRAFT_01501 at 371.828 kb on - strand at 371.897 kb on + strand at 371.931 kb on + strand at 371.931 kb on + strand at 371.931 kb on + strand at 372.216 kb on - strand at 372.394 kb on + strand, within H281DRAFT_01502 at 372.410 kb on + strand, within H281DRAFT_01502 at 372.587 kb on + strand, within H281DRAFT_01502 at 372.588 kb on - strand, within H281DRAFT_01502 at 372.829 kb on - strand at 373.076 kb on + strand, within H281DRAFT_01503 at 373.077 kb on - strand, within H281DRAFT_01503 at 373.079 kb on - strand, within H281DRAFT_01503 at 373.079 kb on - strand, within H281DRAFT_01503 at 373.079 kb on - strand, within H281DRAFT_01503 at 373.079 kb on - strand, within H281DRAFT_01503 at 373.304 kb on + strand, within H281DRAFT_01503 at 373.305 kb on - strand, within H281DRAFT_01503 at 373.513 kb on - strand at 373.520 kb on + strand at 373.521 kb on - strand at 373.535 kb on - strand at 373.711 kb on + strand at 373.711 kb on + strand at 373.712 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 371,368 + H281DRAFT_01501 0.59 -0.7 371,369 - H281DRAFT_01501 0.59 +0.0 371,369 - H281DRAFT_01501 0.59 +0.6 371,564 + H281DRAFT_01501 0.77 +0.3 371,564 + H281DRAFT_01501 0.77 +0.1 371,634 - H281DRAFT_01501 0.83 +1.0 371,652 - H281DRAFT_01501 0.85 +0.3 371,828 - -0.1 371,897 + +1.0 371,931 + +0.2 371,931 + +0.7 371,931 + -0.7 372,216 - +0.5 372,394 + H281DRAFT_01502 0.14 +0.3 372,410 + H281DRAFT_01502 0.19 +0.9 372,587 + H281DRAFT_01502 0.65 +0.3 372,588 - H281DRAFT_01502 0.66 +1.1 372,829 - +0.9 373,076 + H281DRAFT_01503 0.41 -0.3 373,077 - H281DRAFT_01503 0.41 +0.8 373,079 - H281DRAFT_01503 0.41 +0.7 373,079 - H281DRAFT_01503 0.41 +0.6 373,079 - H281DRAFT_01503 0.41 -0.0 373,079 - H281DRAFT_01503 0.41 -0.6 373,304 + H281DRAFT_01503 0.79 +0.3 373,305 - H281DRAFT_01503 0.79 +0.0 373,513 - +0.4 373,520 + +0.2 373,521 - -0.1 373,535 - +0.2 373,711 + +0.3 373,711 + -0.5 373,712 - +0.5
Or see this region's nucleotide sequence