Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00771 and H281DRAFT_00772 are separated by 109 nucleotides H281DRAFT_00772 and H281DRAFT_00773 are separated by 28 nucleotides H281DRAFT_00773 and H281DRAFT_00774 are separated by 275 nucleotides H281DRAFT_00774 and H281DRAFT_00775 are separated by 192 nucleotides
H281DRAFT_00771: H281DRAFT_00771 - hypothetical protein, at 858,908 to 859,330
_00771
H281DRAFT_00772: H281DRAFT_00772 - nodulation factor export ABC transporter transmembrane subunit NodJ, at 859,440 to 860,267
_00772
H281DRAFT_00773: H281DRAFT_00773 - nodulation factor export ABC transporter ATP-binding protein NodI, at 860,296 to 861,210
_00773
H281DRAFT_00774: H281DRAFT_00774 - Nucleotide-binding universal stress protein, UspA family, at 861,486 to 861,950
_00774
H281DRAFT_00775: H281DRAFT_00775 - Protein of unknown function (DUF2939), at 862,143 to 862,826
_00775
Position (kb) 860
861
862 Strain fitness (log2 ratio) -1
0
1 at 859.441 kb on + strand at 859.441 kb on + strand at 859.441 kb on + strand at 859.482 kb on - strand at 859.482 kb on - strand at 859.966 kb on + strand, within H281DRAFT_00772 at 860.035 kb on + strand, within H281DRAFT_00772 at 860.095 kb on + strand, within H281DRAFT_00772 at 860.096 kb on - strand, within H281DRAFT_00772 at 860.117 kb on + strand, within H281DRAFT_00772 at 860.118 kb on - strand, within H281DRAFT_00772 at 860.158 kb on + strand, within H281DRAFT_00772 at 860.420 kb on + strand, within H281DRAFT_00773 at 860.932 kb on - strand, within H281DRAFT_00773 at 861.372 kb on - strand at 861.372 kb on - strand at 861.372 kb on - strand at 861.869 kb on + strand, within H281DRAFT_00774 at 861.869 kb on + strand, within H281DRAFT_00774 at 861.869 kb on + strand, within H281DRAFT_00774 at 862.063 kb on - strand at 862.210 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 859,441 + +1.4 859,441 + +0.2 859,441 + -1.0 859,482 - -0.7 859,482 - -0.2 859,966 + H281DRAFT_00772 0.64 -0.1 860,035 + H281DRAFT_00772 0.72 -1.7 860,095 + H281DRAFT_00772 0.79 -0.0 860,096 - H281DRAFT_00772 0.79 +0.3 860,117 + H281DRAFT_00772 0.82 +0.5 860,118 - H281DRAFT_00772 0.82 +0.2 860,158 + H281DRAFT_00772 0.87 -0.1 860,420 + H281DRAFT_00773 0.14 +0.5 860,932 - H281DRAFT_00773 0.70 +0.9 861,372 - +0.6 861,372 - +0.6 861,372 - -0.3 861,869 + H281DRAFT_00774 0.82 -0.3 861,869 + H281DRAFT_00774 0.82 +0.1 861,869 + H281DRAFT_00774 0.82 -0.2 862,063 - +0.5 862,210 + +0.9
Or see this region's nucleotide sequence