Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00766 and H281DRAFT_00767 are separated by 89 nucleotides H281DRAFT_00767 and H281DRAFT_00768 are separated by 91 nucleotides H281DRAFT_00768 and H281DRAFT_00769 are separated by 262 nucleotides H281DRAFT_00769 and H281DRAFT_00770 are separated by 141 nucleotides
H281DRAFT_00766: H281DRAFT_00766 - tRNA-U16,U17-dihydrouridine synthase, at 855,475 to 856,428
_00766
H281DRAFT_00767: H281DRAFT_00767 - tRNA_His_GTG, at 856,518 to 856,593
_00767
H281DRAFT_00768: H281DRAFT_00768 - hypothetical protein, at 856,685 to 857,026
_00768
H281DRAFT_00769: H281DRAFT_00769 - hypothetical protein, at 857,289 to 857,501
_00769
H281DRAFT_00770: H281DRAFT_00770 - Predicted oxidoreductase, at 857,643 to 858,695
_00770
Position (kb) 857
858 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 856.298 kb on - strand, within H281DRAFT_00766 at 856.375 kb on - strand at 856.375 kb on - strand at 856.375 kb on - strand at 856.375 kb on - strand at 856.608 kb on + strand at 856.831 kb on - strand, within H281DRAFT_00768 at 856.833 kb on + strand, within H281DRAFT_00768 at 856.833 kb on + strand, within H281DRAFT_00768 at 856.890 kb on + strand, within H281DRAFT_00768 at 856.914 kb on + strand, within H281DRAFT_00768 at 856.926 kb on + strand, within H281DRAFT_00768 at 856.926 kb on + strand, within H281DRAFT_00768 at 856.927 kb on - strand, within H281DRAFT_00768 at 856.927 kb on - strand, within H281DRAFT_00768 at 856.944 kb on + strand, within H281DRAFT_00768 at 856.945 kb on - strand, within H281DRAFT_00768 at 856.945 kb on - strand, within H281DRAFT_00768 at 857.047 kb on + strand at 857.047 kb on + strand at 857.048 kb on - strand at 857.048 kb on - strand at 857.048 kb on - strand at 857.048 kb on - strand at 857.048 kb on - strand at 857.102 kb on + strand at 857.151 kb on + strand at 857.201 kb on + strand at 857.201 kb on + strand at 857.202 kb on - strand at 857.222 kb on + strand at 857.257 kb on + strand at 857.258 kb on - strand at 857.258 kb on - strand at 857.446 kb on + strand, within H281DRAFT_00769 at 857.447 kb on - strand, within H281DRAFT_00769 at 857.598 kb on + strand at 857.598 kb on + strand at 857.613 kb on - strand at 857.613 kb on - strand at 857.613 kb on - strand at 857.620 kb on + strand at 857.621 kb on - strand at 857.621 kb on - strand at 857.621 kb on - strand at 857.621 kb on - strand at 857.622 kb on + strand at 857.622 kb on + strand at 857.623 kb on - strand at 857.626 kb on + strand at 857.627 kb on - strand at 857.674 kb on + strand at 857.674 kb on + strand at 857.675 kb on - strand at 857.675 kb on - strand at 857.675 kb on - strand at 857.675 kb on - strand at 857.754 kb on + strand, within H281DRAFT_00770 at 857.799 kb on + strand, within H281DRAFT_00770 at 857.847 kb on - strand, within H281DRAFT_00770 at 857.945 kb on + strand, within H281DRAFT_00770 at 858.028 kb on - strand, within H281DRAFT_00770 at 858.028 kb on - strand, within H281DRAFT_00770 at 858.066 kb on - strand, within H281DRAFT_00770 at 858.112 kb on - strand, within H281DRAFT_00770 at 858.112 kb on - strand, within H281DRAFT_00770 at 858.388 kb on - strand, within H281DRAFT_00770 at 858.483 kb on + strand at 858.483 kb on + strand, within H281DRAFT_00770 at 858.483 kb on + strand, within H281DRAFT_00770
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 856,298 - H281DRAFT_00766 0.86 +0.8 856,375 - +0.7 856,375 - +0.3 856,375 - +0.6 856,375 - -0.1 856,608 + -0.2 856,831 - H281DRAFT_00768 0.43 -0.2 856,833 + H281DRAFT_00768 0.43 +0.4 856,833 + H281DRAFT_00768 0.43 +0.3 856,890 + H281DRAFT_00768 0.60 +0.6 856,914 + H281DRAFT_00768 0.67 +0.4 856,926 + H281DRAFT_00768 0.70 -1.3 856,926 + H281DRAFT_00768 0.70 +0.0 856,927 - H281DRAFT_00768 0.71 -0.1 856,927 - H281DRAFT_00768 0.71 -0.0 856,944 + H281DRAFT_00768 0.76 +0.1 856,945 - H281DRAFT_00768 0.76 -0.3 856,945 - H281DRAFT_00768 0.76 -3.2 857,047 + +1.2 857,047 + +0.5 857,048 - -0.1 857,048 - -0.8 857,048 - +0.9 857,048 - -1.4 857,048 - +0.0 857,102 + +0.1 857,151 + +0.3 857,201 + +0.5 857,201 + -0.8 857,202 - +0.1 857,222 + -0.3 857,257 + +0.0 857,258 - +0.6 857,258 - +0.1 857,446 + H281DRAFT_00769 0.74 +0.8 857,447 - H281DRAFT_00769 0.74 +0.4 857,598 + -0.3 857,598 + +0.0 857,613 - -0.6 857,613 - +0.6 857,613 - +0.3 857,620 + -0.4 857,621 - +0.4 857,621 - +0.2 857,621 - -0.3 857,621 - +0.1 857,622 + +1.7 857,622 + +0.1 857,623 - +0.3 857,626 + -0.1 857,627 - -0.5 857,674 + +0.7 857,674 + -0.4 857,675 - +0.4 857,675 - +0.1 857,675 - -0.8 857,675 - -0.5 857,754 + H281DRAFT_00770 0.11 +0.5 857,799 + H281DRAFT_00770 0.15 +0.5 857,847 - H281DRAFT_00770 0.19 +0.4 857,945 + H281DRAFT_00770 0.29 +0.8 858,028 - H281DRAFT_00770 0.37 -0.1 858,028 - H281DRAFT_00770 0.37 -1.8 858,066 - H281DRAFT_00770 0.40 +0.2 858,112 - H281DRAFT_00770 0.45 -0.5 858,112 - H281DRAFT_00770 0.45 +0.7 858,388 - H281DRAFT_00770 0.71 +0.7 858,483 + +1.4 858,483 + H281DRAFT_00770 0.80 +0.1 858,483 + H281DRAFT_00770 0.80 +0.6
Or see this region's nucleotide sequence