Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00600 and H281DRAFT_00601 are separated by 422 nucleotides H281DRAFT_00601 and H281DRAFT_00602 are separated by 159 nucleotides
H281DRAFT_00600: H281DRAFT_00600 - succinyldiaminopimelate aminotransferase apoenzyme, at 668,730 to 669,947
_00600
H281DRAFT_00601: H281DRAFT_00601 - Permease of the drug/metabolite transporter (DMT) superfamily, at 670,370 to 671,407
_00601
H281DRAFT_00602: H281DRAFT_00602 - condensin subunit Smc, at 671,567 to 675,085
_00602
Position (kb) 670
671
672 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 669.424 kb on + strand, within H281DRAFT_00600 at 669.424 kb on + strand, within H281DRAFT_00600 at 669.424 kb on + strand, within H281DRAFT_00600 at 669.424 kb on + strand, within H281DRAFT_00600 at 669.424 kb on + strand, within H281DRAFT_00600 at 669.425 kb on - strand, within H281DRAFT_00600 at 669.500 kb on + strand, within H281DRAFT_00600 at 669.547 kb on + strand, within H281DRAFT_00600 at 669.576 kb on + strand, within H281DRAFT_00600 at 669.576 kb on + strand, within H281DRAFT_00600 at 669.577 kb on - strand, within H281DRAFT_00600 at 669.854 kb on + strand at 669.854 kb on + strand at 669.855 kb on - strand at 670.026 kb on - strand at 670.158 kb on + strand at 670.158 kb on + strand at 670.158 kb on + strand at 670.211 kb on - strand at 670.241 kb on + strand at 670.241 kb on + strand at 670.242 kb on - strand at 670.279 kb on - strand at 670.671 kb on - strand, within H281DRAFT_00601 at 670.896 kb on + strand, within H281DRAFT_00601 at 671.371 kb on + strand at 671.372 kb on - strand at 671.404 kb on - strand at 671.534 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 669,424 + H281DRAFT_00600 0.57 -0.7 669,424 + H281DRAFT_00600 0.57 -0.6 669,424 + H281DRAFT_00600 0.57 -0.1 669,424 + H281DRAFT_00600 0.57 -3.2 669,424 + H281DRAFT_00600 0.57 -0.1 669,425 - H281DRAFT_00600 0.57 +0.2 669,500 + H281DRAFT_00600 0.63 +0.1 669,547 + H281DRAFT_00600 0.67 +0.5 669,576 + H281DRAFT_00600 0.69 -0.4 669,576 + H281DRAFT_00600 0.69 -0.7 669,577 - H281DRAFT_00600 0.70 -1.0 669,854 + +1.1 669,854 + +0.5 669,855 - -0.7 670,026 - -0.6 670,158 + +0.4 670,158 + +0.2 670,158 + -0.3 670,211 - -2.8 670,241 + -0.6 670,241 + +0.1 670,242 - +0.5 670,279 - +0.3 670,671 - H281DRAFT_00601 0.29 +0.2 670,896 + H281DRAFT_00601 0.51 +0.9 671,371 + +0.3 671,372 - -1.0 671,404 - +0.4 671,534 + +0.8
Or see this region's nucleotide sequence