Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00122 and H281DRAFT_00123 are separated by 137 nucleotides H281DRAFT_00123 and H281DRAFT_00124 are separated by 79 nucleotides H281DRAFT_00124 and H281DRAFT_00125 are separated by 90 nucleotides
H281DRAFT_00122: H281DRAFT_00122 - lipopolysaccharide export system permease protein, at 129,414 to 130,511
_00122
H281DRAFT_00123: H281DRAFT_00123 - aminopeptidase A. Metallo peptidase. MEROPS family M17, at 130,649 to 132,160
_00123
H281DRAFT_00124: H281DRAFT_00124 - DNA polymerase III, chi subunit, at 132,240 to 132,656
_00124
H281DRAFT_00125: H281DRAFT_00125 - Protein of unknown function (DUF2486), at 132,747 to 133,460
_00125
Position (kb) 130
131
132
133 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 130.513 kb on - strand at 130.513 kb on - strand at 130.663 kb on - strand at 130.899 kb on + strand at 130.899 kb on + strand, within H281DRAFT_00123 at 131.086 kb on + strand, within H281DRAFT_00123 at 131.274 kb on - strand, within H281DRAFT_00123 at 131.936 kb on + strand, within H281DRAFT_00123 at 132.609 kb on + strand, within H281DRAFT_00124 at 132.639 kb on + strand at 132.639 kb on + strand at 132.639 kb on + strand at 132.639 kb on + strand at 132.639 kb on + strand at 132.639 kb on + strand at 132.640 kb on - strand at 132.704 kb on + strand at 132.705 kb on - strand at 132.734 kb on - strand at 132.765 kb on - strand at 133.100 kb on + strand, within H281DRAFT_00125 at 133.100 kb on + strand, within H281DRAFT_00125 at 133.101 kb on - strand, within H281DRAFT_00125 at 133.101 kb on - strand, within H281DRAFT_00125 at 133.101 kb on - strand, within H281DRAFT_00125 at 133.101 kb on - strand, within H281DRAFT_00125
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 130,513 - +0.3 130,513 - +0.3 130,663 - +1.1 130,899 + -0.2 130,899 + H281DRAFT_00123 0.17 -3.1 131,086 + H281DRAFT_00123 0.29 +0.1 131,274 - H281DRAFT_00123 0.41 -3.2 131,936 + H281DRAFT_00123 0.85 +0.2 132,609 + H281DRAFT_00124 0.88 +0.0 132,639 + +0.5 132,639 + -0.8 132,639 + -0.2 132,639 + +0.3 132,639 + +0.1 132,639 + -0.2 132,640 - +0.0 132,704 + +0.0 132,705 - -0.5 132,734 - -0.2 132,765 - +0.2 133,100 + H281DRAFT_00125 0.49 +0.5 133,100 + H281DRAFT_00125 0.49 +0.4 133,101 - H281DRAFT_00125 0.50 +1.3 133,101 - H281DRAFT_00125 0.50 +0.3 133,101 - H281DRAFT_00125 0.50 -0.1 133,101 - H281DRAFT_00125 0.50 -1.6
Or see this region's nucleotide sequence