Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00105 and H281DRAFT_00106 are separated by 74 nucleotides H281DRAFT_00106 and H281DRAFT_00107 are separated by 68 nucleotides
H281DRAFT_00105: H281DRAFT_00105 - monosaccharide ABC transporter membrane protein, CUT2 family, at 109,806 to 110,819
_00105
H281DRAFT_00106: H281DRAFT_00106 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 110,894 to 111,856
_00106
H281DRAFT_00107: H281DRAFT_00107 - Sugar phosphate isomerase/epimerase, at 111,925 to 112,974
_00107
Position (kb) 110
111
112 Strain fitness (log2 ratio) -2
-1
0
1 at 110.343 kb on + strand, within H281DRAFT_00105 at 110.492 kb on - strand, within H281DRAFT_00105 at 110.492 kb on - strand, within H281DRAFT_00105 at 110.521 kb on - strand, within H281DRAFT_00105 at 110.752 kb on - strand at 110.823 kb on + strand at 111.521 kb on + strand, within H281DRAFT_00106 at 111.521 kb on + strand, within H281DRAFT_00106 at 111.522 kb on - strand, within H281DRAFT_00106 at 111.921 kb on + strand at 111.922 kb on - strand at 112.146 kb on + strand, within H281DRAFT_00107 at 112.199 kb on - strand, within H281DRAFT_00107 at 112.358 kb on - strand, within H281DRAFT_00107 at 112.474 kb on + strand, within H281DRAFT_00107 at 112.604 kb on - strand, within H281DRAFT_00107 at 112.625 kb on - strand, within H281DRAFT_00107 at 112.693 kb on + strand, within H281DRAFT_00107 at 112.705 kb on - strand, within H281DRAFT_00107
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 110,343 + H281DRAFT_00105 0.53 -0.4 110,492 - H281DRAFT_00105 0.68 -1.2 110,492 - H281DRAFT_00105 0.68 +0.2 110,521 - H281DRAFT_00105 0.71 +0.4 110,752 - +0.8 110,823 + -0.5 111,521 + H281DRAFT_00106 0.65 +1.5 111,521 + H281DRAFT_00106 0.65 -1.3 111,522 - H281DRAFT_00106 0.65 +0.8 111,921 + +0.3 111,922 - +0.5 112,146 + H281DRAFT_00107 0.21 +0.3 112,199 - H281DRAFT_00107 0.26 -0.0 112,358 - H281DRAFT_00107 0.41 -0.8 112,474 + H281DRAFT_00107 0.52 +0.4 112,604 - H281DRAFT_00107 0.65 +1.4 112,625 - H281DRAFT_00107 0.67 +0.5 112,693 + H281DRAFT_00107 0.73 -2.2 112,705 - H281DRAFT_00107 0.74 -1.4
Or see this region's nucleotide sequence