Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02718

Experiment: PYE_noCalcium 25C survival rep1 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep1 28 days
2,878,125	+		CCNA_02716	0.75	+0.0
2,878,125	+		CCNA_02716	0.75	-1.4
2,878,125	+		CCNA_02716	0.75	+0.1
2,878,150	-		CCNA_02716	0.78	-1.8
2,878,172	+		CCNA_02716	0.80	+0.8
2,878,284	+				+0.6
2,878,303	-				-0.3
2,878,308	+				+0.0
2,878,308	+				+1.4
2,878,329	-				+0.2
2,878,338	+				-1.7
2,878,338	+				+3.0
2,878,339	+				-1.7
2,878,346	-				-1.0
2,878,346	-				+0.7
2,878,346	-				+1.1
2,878,346	-				-0.3
2,878,346	-				+0.4
2,878,346	-				-0.8
2,878,365	+				+1.3
2,878,367	-				+0.1
2,878,392	-				+0.4
2,878,429	+				-1.2
2,878,429	+				+0.5
2,878,429	+				+0.1
2,878,437	+				+0.3
2,878,437	-				-1.8
2,878,460	+		CCNA_02717	0.12	+0.7
2,878,476	+		CCNA_02717	0.14	-1.0
2,878,502	+		CCNA_02717	0.17	-0.1
2,878,502	+		CCNA_02717	0.17	+0.0
2,878,510	-		CCNA_02717	0.19	-1.8
2,878,517	-		CCNA_02717	0.19	-1.9
2,878,569	+		CCNA_02717	0.26	-0.2
2,878,574	+		CCNA_02717	0.27	+1.3
2,878,574	+		CCNA_02717	0.27	+1.7
2,878,574	+		CCNA_02717	0.27	+0.5
2,878,582	-		CCNA_02717	0.28	-0.2
2,878,583	-		CCNA_02717	0.28	+1.0
2,878,599	+		CCNA_02717	0.30	+0.3
2,878,654	-		CCNA_02717	0.38	+0.4
2,878,675	-		CCNA_02717	0.41	+1.1
2,878,706	+		CCNA_02717	0.45	+0.1
2,878,728	+		CCNA_02717	0.48	-0.1
2,878,728	+		CCNA_02717	0.48	-1.7
2,878,736	-		CCNA_02717	0.49	+0.1
2,878,759	-		CCNA_02717	0.52	-4.0
2,878,770	-		CCNA_02717	0.53	+0.8
2,878,804	+		CCNA_02717	0.58	+0.8
2,878,804	-		CCNA_02717	0.58	+0.1
2,878,850	-		CCNA_02717	0.64	-1.2
2,878,852	-		CCNA_02717	0.64	+0.0
2,878,868	+		CCNA_02717	0.66	+1.0
2,878,878	+		CCNA_02717	0.68	+1.7
2,878,878	+		CCNA_02717	0.68	-0.9
2,878,878	+		CCNA_02717	0.68	+2.4
2,878,883	+		CCNA_02717	0.68	+0.8
2,878,886	-		CCNA_02717	0.69	-0.5
2,878,886	-		CCNA_02717	0.69	-0.6
2,878,886	-		CCNA_02717	0.69	+0.1
2,878,922	-		CCNA_02717	0.73	+1.9
2,878,932	+		CCNA_02717	0.75	+0.6
2,878,932	+		CCNA_02717	0.75	+0.7
2,878,940	-		CCNA_02717	0.76	-1.1
2,878,961	+		CCNA_02717	0.79	+0.9
2,878,975	-		CCNA_02717	0.81	+0.9
2,879,012	-		CCNA_02717	0.85	-0.5
2,879,049	+				+1.2
2,879,108	-				-1.4
2,879,143	-				+1.7
2,879,166	+				-0.1
2,879,166	+				+1.3
2,879,171	+				-0.2
2,879,174	-				-0.9
2,879,179	-				+0.7
2,879,195	+		CCNA_02718	0.10	+0.5
2,879,236	-		CCNA_02718	0.16	+0.7
2,879,238	+		CCNA_02718	0.16	-0.6
2,879,246	-		CCNA_02718	0.17	+1.5
2,879,246	-		CCNA_02718	0.17	-1.3
2,879,271	-		CCNA_02718	0.20	-0.8
2,879,272	+		CCNA_02718	0.20	+0.6
2,879,273	+		CCNA_02718	0.21	-1.0
2,879,273	+		CCNA_02718	0.21	+1.3
2,879,273	+		CCNA_02718	0.21	-0.5
2,879,280	-		CCNA_02718	0.21	-0.5
2,879,280	-		CCNA_02718	0.21	+1.7
2,879,281	-		CCNA_02718	0.22	+0.5
2,879,281	-		CCNA_02718	0.22	+1.3
2,879,282	+		CCNA_02718	0.22	-1.4
2,879,282	+		CCNA_02718	0.22	+1.5
2,879,285	-		CCNA_02718	0.22	-1.0
2,879,316	-		CCNA_02718	0.26	-0.3
2,879,342	+		CCNA_02718	0.30	-1.2
2,879,361	-		CCNA_02718	0.32	-0.6
2,879,376	+		CCNA_02718	0.34	+1.4
2,879,434	+		CCNA_02718	0.42	-2.1
2,879,457	+		CCNA_02718	0.45	+0.2
2,879,531	+		CCNA_02718	0.55	+1.0
2,879,546	+		CCNA_02718	0.57	-0.5
2,879,546	+		CCNA_02718	0.57	+1.7
2,879,612	+		CCNA_02718	0.65	+0.9
2,879,612	+		CCNA_02718	0.65	+0.8
2,879,612	+		CCNA_02718	0.65	+2.5
2,879,612	+		CCNA_02718	0.65	+1.2
2,879,620	-		CCNA_02718	0.66	-0.3
2,879,622	+		CCNA_02718	0.67	+1.1
2,879,625	-		CCNA_02718	0.67	-0.3
2,879,627	+		CCNA_02718	0.67	-0.1
2,879,638	+		CCNA_02718	0.69	-0.3
2,879,646	-		CCNA_02718	0.70	+0.2
2,879,647	+		CCNA_02718	0.70	+1.0
2,879,658	-		CCNA_02718	0.71	-0.5
2,879,677	-		CCNA_02718	0.74	-0.7
2,879,722	+		CCNA_02718	0.80	+1.1
2,879,731	-		CCNA_02718	0.81	-1.3
2,879,746	-		CCNA_02718	0.83	+1.4
2,879,773	+		CCNA_02718	0.86	+0.6
2,879,773	+		CCNA_02718	0.86	-0.1
2,879,774	-		CCNA_02718	0.87	-1.2
2,879,781	-		CCNA_02718	0.87	-0.3
2,879,782	-		CCNA_02718	0.88	+1.6
2,879,788	+		CCNA_02718	0.88	+0.8
2,879,791	-		CCNA_02718	0.89	+0.5
2,879,816	-				-0.5
2,879,880	+				+0.0
2,879,888	-				+0.4
2,879,889	-				-1.2
2,879,895	+				-0.2
2,879,895	+				-0.7
2,879,895	+				+0.8
2,879,900	+				+1.2
2,879,903	-				-1.4
2,879,903	-				+0.5
2,879,919	-				+0.7
2,879,961	+				-0.3
2,879,961	+				+0.3
2,879,961	+				+0.9
2,879,961	+				+3.0
2,879,961	+				+0.7
2,879,966	+				+1.1
2,879,966	+				-0.9
2,879,969	-				-0.6
2,879,969	-				-0.6
2,879,969	-				+0.1
2,879,969	-				-2.6
2,879,987	+				+1.7
2,880,011	+		CCNA_02719	0.12	+0.2
2,880,028	+		CCNA_02719	0.15	-1.2
2,880,028	+		CCNA_02719	0.15	+0.8
2,880,028	+		CCNA_02719	0.15	-0.1
2,880,029	-		CCNA_02719	0.15	+1.7
2,880,036	-		CCNA_02719	0.16	-1.2
2,880,062	+		CCNA_02719	0.20	+0.7
2,880,079	+		CCNA_02719	0.23	+0.6
2,880,086	-		CCNA_02719	0.24	-2.9
2,880,094	+		CCNA_02719	0.26	+0.7
2,880,121	+		CCNA_02719	0.30	+2.2
2,880,134	+		CCNA_02719	0.32	+0.7
2,880,147	-		CCNA_02719	0.34	-0.1
2,880,152	-		CCNA_02719	0.35	+1.1
2,880,158	+		CCNA_02719	0.36	+0.8
2,880,193	-		CCNA_02719	0.42	-0.7
2,880,240	+		CCNA_02719	0.49	+1.1
2,880,248	-		CCNA_02719	0.51	+1.3
2,880,249	+		CCNA_02719	0.51	+2.1
2,880,249	+		CCNA_02719	0.51	+0.8
2,880,277	+		CCNA_02719	0.55	+1.0
2,880,281	+		CCNA_02719	0.56	+1.5
2,880,287	-		CCNA_02719	0.57	+1.2
2,880,289	-		CCNA_02719	0.57	+0.9
2,880,312	-		CCNA_02719	0.61	-2.2
2,880,329	-		CCNA_02719	0.64	-1.5
2,880,357	+		CCNA_02719	0.68	+0.2
2,880,362	+		CCNA_02719	0.69	+1.9
2,880,365	-		CCNA_02719	0.70	-1.9
2,880,377	-		CCNA_02719	0.72	+0.5
2,880,403	-		CCNA_02719	0.76	-0.3
2,880,416	+		CCNA_02719	0.78	+1.6
2,880,432	-		CCNA_02719	0.80	+0.5
2,880,437	+		CCNA_02719	0.81	-0.8
2,880,449	+		CCNA_02719	0.83	+1.1
2,880,457	-		CCNA_02719	0.85	+0.4
2,880,458	+		CCNA_02719	0.85	+1.8
2,880,495	+				-0.1
2,880,503	-				-0.6
2,880,514	+				+0.4
2,880,522	-				-2.1
2,880,528	+				+0.8
2,880,575	+				+1.1
2,880,595	-				-2.4
2,880,599	-				+0.5
2,880,614	+				-0.1
2,880,622	-				-0.0
2,880,622	-				-1.2
2,880,647	+				+1.2
2,880,653	+				-0.6
2,880,653	+				+1.6
2,880,653	+				-0.4
2,880,653	+				+0.1
2,880,653	+				-0.0
2,880,653	+				-0.9
2,880,653	+				+1.6
2,880,653	+				+0.8
2,880,653	+				+0.2
2,880,653	+				+0.7
2,880,653	+				+0.4
2,880,653	+				+0.9
2,880,653	+				+2.2
2,880,653	+				+0.7
2,880,661	-		CCNA_02720	0.10	-0.4
2,880,661	-		CCNA_02720	0.10	-0.6
2,880,661	-		CCNA_02720	0.10	+0.5
2,880,661	-		CCNA_02720	0.10	-2.0
2,880,661	-		CCNA_02720	0.10	+1.4
2,880,661	-		CCNA_02720	0.10	+2.4
2,880,661	-		CCNA_02720	0.10	-1.1
2,880,661	-		CCNA_02720	0.10	-1.5
2,880,661	-		CCNA_02720	0.10	-0.6
2,880,661	-		CCNA_02720	0.10	+0.1
2,880,661	-		CCNA_02720	0.10	+1.1
2,880,661	-		CCNA_02720	0.10	+0.5
2,880,663	-		CCNA_02720	0.11	+2.5
2,880,663	-		CCNA_02720	0.11	+0.6
2,880,663	-		CCNA_02720	0.11	+0.4
2,880,668	+		CCNA_02720	0.11	+2.5
2,880,669	+		CCNA_02720	0.11	+1.0
2,880,676	-		CCNA_02720	0.12	-0.4
2,880,689	+		CCNA_02720	0.13	+0.7
2,880,697	-		CCNA_02720	0.14	-1.5
2,880,697	-		CCNA_02720	0.14	+2.7
2,880,723	-		CCNA_02720	0.16	+1.4
2,880,734	+		CCNA_02720	0.17	+0.1
2,880,737	-		CCNA_02720	0.17	-1.8
2,880,740	+		CCNA_02720	0.18	+0.1
2,880,742	-		CCNA_02720	0.18	-1.2
2,880,746	+		CCNA_02720	0.18	+0.9
2,880,765	-		CCNA_02720	0.20	-1.4
2,880,781	+		CCNA_02720	0.21	-2.2
2,880,781	+		CCNA_02720	0.21	+0.4
2,880,791	+		CCNA_02720	0.22	+0.3
2,880,823	-		CCNA_02720	0.25	+2.7
2,880,865	+		CCNA_02720	0.29	+0.6