Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02546

Experiment: PYE_noCalcium 25C survival rep1 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep1 28 days
2,693,604	-		CCNA_02545	0.48	+1.7
2,693,622	+		CCNA_02545	0.49	+0.7
2,693,649	-		CCNA_02545	0.51	+1.7
2,693,659	-		CCNA_02545	0.51	+2.2
2,693,659	-		CCNA_02545	0.51	+1.9
2,693,730	+		CCNA_02545	0.56	+0.1
2,693,730	-		CCNA_02545	0.56	-0.1
2,693,922	+		CCNA_02545	0.67	+1.9
2,693,922	+		CCNA_02545	0.67	+3.7
2,693,930	-		CCNA_02545	0.68	+1.2
2,693,930	-		CCNA_02545	0.68	+0.8
2,693,937	+		CCNA_02545	0.68	-1.3
2,693,968	+		CCNA_02545	0.70	+1.9
2,693,968	+		CCNA_02545	0.70	+1.8
2,693,976	-		CCNA_02545	0.70	+1.7
2,693,981	-		CCNA_02545	0.71	+0.4
2,694,045	+		CCNA_02545	0.74	+3.3
2,694,053	-		CCNA_02545	0.75	+1.0
2,694,061	+		CCNA_02545	0.75	-2.8
2,694,090	-		CCNA_02545	0.77	+1.1
2,694,125	+		CCNA_02545	0.79	+0.0
2,694,132	+		CCNA_02545	0.80	-0.9
2,694,137	+		CCNA_02545	0.80	-0.0
2,694,145	-		CCNA_02545	0.80	-0.3
2,694,162	-		CCNA_02545	0.81	+1.8
2,694,164	+		CCNA_02545	0.81	+0.4
2,694,167	-		CCNA_02545	0.82	-1.1
2,694,219	+		CCNA_02545	0.85	-1.4
2,694,251	-		CCNA_02545	0.87	+0.4
2,694,256	+		CCNA_02545	0.87	+1.1
2,694,269	-		CCNA_02545	0.88	+5.0
2,694,274	-		CCNA_02545	0.88	+0.9
2,694,346	-				-0.3
2,694,346	-				+1.6
2,694,362	+				+2.7
2,694,367	+				-0.3
2,694,375	-				+0.1
2,694,395	+				+1.7
2,694,420	-				+0.6
2,694,432	+				+1.8
2,694,440	-				+1.2
2,694,440	-				+2.2
2,694,440	-				+0.9
2,694,488	-				+2.7
2,694,524	-				+0.9
2,694,551	-				+1.2
2,694,586	-				+2.3
2,694,625	-				-1.2
2,694,658	+				-0.9
2,694,751	-		CCNA_02546	0.13	-1.8
2,694,790	-		CCNA_02546	0.15	-1.2
2,694,802	-		CCNA_02546	0.16	-1.7
2,694,823	-		CCNA_02546	0.18	-2.2
2,694,866	-		CCNA_02546	0.21	-1.0
2,694,873	+		CCNA_02546	0.21	-0.6
2,694,906	+		CCNA_02546	0.24	+0.1
2,694,976	+		CCNA_02546	0.29	+1.1
2,695,059	-		CCNA_02546	0.35	-1.6
2,695,068	+		CCNA_02546	0.36	-1.6
2,695,083	+		CCNA_02546	0.37	-2.3
2,695,083	+		CCNA_02546	0.37	+0.1
2,695,091	-		CCNA_02546	0.37	-3.2
2,695,100	+		CCNA_02546	0.38	+1.1
2,695,103	-		CCNA_02546	0.38	-1.0
2,695,121	-		CCNA_02546	0.40	-0.7
2,695,129	-		CCNA_02546	0.40	-1.6
2,695,129	-		CCNA_02546	0.40	-2.3
2,695,133	+		CCNA_02546	0.41	-0.3
2,695,133	+		CCNA_02546	0.41	-0.4
2,695,141	-		CCNA_02546	0.41	+0.3
2,695,175	-		CCNA_02546	0.44	-2.9
2,695,250	+		CCNA_02546	0.49	-0.1
2,695,269	+		CCNA_02546	0.50	-0.4
2,695,277	-		CCNA_02546	0.51	-1.9
2,695,312	-		CCNA_02546	0.54	-1.8
2,695,324	+		CCNA_02546	0.55	+1.7
2,695,345	-		CCNA_02546	0.56	-1.2
2,695,345	-		CCNA_02546	0.56	-1.2
2,695,394	-		CCNA_02546	0.60	-1.8
2,695,394	-		CCNA_02546	0.60	-3.1
2,695,397	+		CCNA_02546	0.60	-1.3
2,695,407	-		CCNA_02546	0.61	-1.4
2,695,416	+		CCNA_02546	0.61	+2.7
2,695,422	-		CCNA_02546	0.62	-1.0
2,695,428	+		CCNA_02546	0.62	-0.4
2,695,450	-		CCNA_02546	0.64	-0.6
2,695,455	-		CCNA_02546	0.64	-2.5
2,695,485	+		CCNA_02546	0.66	-1.1
2,695,495	+		CCNA_02546	0.67	+0.1
2,695,503	-		CCNA_02546	0.68	-1.3
2,695,534	-		CCNA_02546	0.70	-2.4
2,695,545	-		CCNA_02546	0.71	-1.2
2,695,558	-		CCNA_02546	0.72	-1.3
2,695,584	+		CCNA_02546	0.74	-1.8
2,695,584	+		CCNA_02546	0.74	-0.6
2,695,592	-		CCNA_02546	0.74	-1.7
2,695,592	-		CCNA_02546	0.74	-0.7
2,695,611	+		CCNA_02546	0.76	-0.6
2,695,617	-		CCNA_02546	0.76	-1.8
2,695,642	-		CCNA_02546	0.78	-1.2
2,695,672	-		CCNA_02546	0.80	-2.0
2,695,697	+		CCNA_02546	0.82	-0.1
2,695,707	-		CCNA_02546	0.83	-1.7
2,695,736	+		CCNA_02546	0.85	-0.9
2,695,751	-		CCNA_02546	0.86	-1.6
2,695,751	-		CCNA_02546	0.86	-2.5
2,695,772	-		CCNA_02546	0.87	-1.4
2,695,809	-				-0.7
2,695,820	+				+1.7
2,695,820	+				-1.4
2,695,820	+				+1.1
2,695,820	+				-2.0
2,695,825	+				-1.3
2,695,825	+				+0.7
2,695,825	+				-0.6
2,695,828	-				-3.2
2,695,828	-				-1.6
2,695,828	-				-1.4
2,695,828	-				-2.3
2,695,828	-				-3.0
2,695,828	-				-2.0
2,695,828	-				-3.9
2,695,868	-				-0.4
2,695,868	-				+0.7
2,695,875	-				-0.5
2,695,885	+				+1.7
2,695,894	-				-1.1
2,695,946	-				+0.6
2,696,318	+				-1.5
2,696,318	+				-2.3
2,696,318	+				-0.4
2,696,318	+				-1.4
2,696,326	-				+1.2
2,696,326	-				+1.0
2,696,326	-				+0.0
2,696,326	-				-1.2
2,696,326	-				+0.5
2,696,326	-				-0.3
2,696,326	-				+2.7
2,696,326	-				+0.0
2,696,326	-				+0.2
2,696,349	-				+0.5
2,696,375	-				+0.4
2,696,390	+				-0.4
2,696,395	+				-1.5
2,696,395	+				-0.1
2,696,403	-				-1.5
2,696,403	-				-1.0
2,696,403	-				+0.7
2,696,403	-				-2.3
2,696,403	-				+1.0
2,696,426	+				-1.4
2,696,453	+				-1.4
2,696,456	-				-1.2
2,696,471	+				+1.5
2,696,471	+				-0.4
2,696,471	+				+1.0
2,696,471	+				-0.3
2,696,471	+				+0.4
2,696,476	+				-0.4
2,696,476	+				+0.7
2,696,478	-				+0.2
2,696,479	-				-2.1
2,696,499	-				+0.0
2,696,527	-		CCNA_02548	0.13	-1.9
2,696,540	+		CCNA_02548	0.15	+1.0
2,696,549	+		CCNA_02548	0.17	+0.7
2,696,567	+		CCNA_02548	0.20	+1.2
2,696,575	-		CCNA_02548	0.21	-1.2
2,696,588	+		CCNA_02548	0.23	-0.6
2,696,588	+		CCNA_02548	0.23	+0.8
2,696,598	+		CCNA_02548	0.24	+0.7
2,696,598	+		CCNA_02548	0.24	+2.0
2,696,606	-		CCNA_02548	0.26	-0.4
2,696,607	-		CCNA_02548	0.26	+2.7
2,696,620	+		CCNA_02548	0.28	-1.6
2,696,621	+		CCNA_02548	0.28	+0.6
2,696,629	-		CCNA_02548	0.29	+4.3
2,696,634	-		CCNA_02548	0.30	-0.1
2,696,656	+		CCNA_02548	0.33	-0.6
2,696,692	+		CCNA_02548	0.39	+2.4
2,696,700	-		CCNA_02548	0.40	-2.6
2,696,700	-		CCNA_02548	0.40	-0.1
2,696,700	-		CCNA_02548	0.40	-1.4
2,696,700	-		CCNA_02548	0.40	+0.1
2,696,700	-		CCNA_02548	0.40	+3.7
2,696,700	-		CCNA_02548	0.40	+0.4
2,696,720	+		CCNA_02548	0.43	+0.5
2,696,721	+		CCNA_02548	0.43	-1.0
2,696,724	-		CCNA_02548	0.44	+2.0
2,696,725	-		CCNA_02548	0.44	+0.1
2,696,741	-		CCNA_02548	0.46	+2.7
2,696,751	+		CCNA_02548	0.48	-0.6
2,696,752	-		CCNA_02548	0.48	-0.7
2,696,758	+		CCNA_02548	0.49	+2.1
2,696,758	+		CCNA_02548	0.49	-0.6
2,696,766	-		CCNA_02548	0.50	-0.4
2,696,766	-		CCNA_02548	0.50	+0.7
2,696,804	+		CCNA_02548	0.56	+1.4
2,696,804	+		CCNA_02548	0.56	+4.7
2,696,805	+		CCNA_02548	0.56	+0.7
2,696,825	+		CCNA_02548	0.59	-0.8
2,696,826	-		CCNA_02548	0.60	+1.1
2,696,827	-		CCNA_02548	0.60	-2.1
2,696,830	+		CCNA_02548	0.60	+1.1
2,696,835	+		CCNA_02548	0.61	+2.7
2,696,838	-		CCNA_02548	0.61	+0.8
2,696,851	+		CCNA_02548	0.63	-0.1
2,696,872	+		CCNA_02548	0.67	+0.7
2,696,883	+		CCNA_02548	0.68	+1.3
2,696,883	+		CCNA_02548	0.68	+0.7
2,696,888	+		CCNA_02548	0.69	+2.7
2,696,888	+		CCNA_02548	0.69	+0.4
2,696,888	+		CCNA_02548	0.69	-1.0
2,696,888	+		CCNA_02548	0.69	+1.3
2,696,888	+		CCNA_02548	0.69	+0.6
2,696,888	+		CCNA_02548	0.69	+2.1
2,696,896	-		CCNA_02548	0.70	-1.3
2,696,896	-		CCNA_02548	0.70	-1.4
2,696,916	+		CCNA_02548	0.73	+0.2
2,696,936	-		CCNA_02548	0.77	+0.4