Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5297

Experiment: Sisomicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.0016 mg/ml
6,090,283	+		Pf6N2E2_5296	0.32	+0.2
6,090,283	+		Pf6N2E2_5296	0.32	-0.0
6,090,284	-		Pf6N2E2_5296	0.32	+0.4
6,090,373	+		Pf6N2E2_5296	0.40	-0.4
6,090,373	+		Pf6N2E2_5296	0.40	+0.5
6,090,373	+		Pf6N2E2_5296	0.40	+0.2
6,090,487	+		Pf6N2E2_5296	0.49	+1.1
6,090,487	+		Pf6N2E2_5296	0.49	-1.2
6,090,487	+		Pf6N2E2_5296	0.49	-2.3
6,090,487	+		Pf6N2E2_5296	0.49	+0.1
6,090,487	+		Pf6N2E2_5296	0.49	+0.8
6,090,487	+		Pf6N2E2_5296	0.49	+0.9
6,090,487	+		Pf6N2E2_5296	0.49	+0.0
6,090,487	+		Pf6N2E2_5296	0.49	-1.2
6,090,488	-		Pf6N2E2_5296	0.49	-0.4
6,090,488	-		Pf6N2E2_5296	0.49	-0.3
6,090,488	-		Pf6N2E2_5296	0.49	+0.2
6,090,488	-		Pf6N2E2_5296	0.49	+0.0
6,090,488	-		Pf6N2E2_5296	0.49	-0.1
6,090,514	+		Pf6N2E2_5296	0.51	+0.4
6,090,515	-		Pf6N2E2_5296	0.51	+0.9
6,090,515	-		Pf6N2E2_5296	0.51	+0.9
6,090,565	+		Pf6N2E2_5296	0.55	-0.4
6,090,565	+		Pf6N2E2_5296	0.55	-0.3
6,090,565	+		Pf6N2E2_5296	0.55	+0.2
6,090,566	-		Pf6N2E2_5296	0.55	+0.2
6,090,599	-		Pf6N2E2_5296	0.58	-0.1
6,090,646	+		Pf6N2E2_5296	0.61	-1.2
6,090,646	+		Pf6N2E2_5296	0.61	+1.0
6,090,646	+		Pf6N2E2_5296	0.61	-0.5
6,090,646	+		Pf6N2E2_5296	0.61	+0.8
6,090,647	-		Pf6N2E2_5296	0.61	+0.3
6,090,647	-		Pf6N2E2_5296	0.61	-0.5
6,090,865	+		Pf6N2E2_5296	0.79	-0.2
6,090,865	+		Pf6N2E2_5296	0.79	-0.6
6,090,934	+		Pf6N2E2_5296	0.84	+0.8
6,090,934	+		Pf6N2E2_5296	0.84	+0.9
6,090,934	+		Pf6N2E2_5296	0.84	+0.3
6,090,935	-		Pf6N2E2_5296	0.84	-2.2
6,090,935	-		Pf6N2E2_5296	0.84	+0.0
6,091,051	+				+0.2
6,091,051	+				+1.1
6,091,051	+				+0.2
6,091,051	+				+0.8
6,091,051	+				-0.0
6,091,051	+				+0.5
6,091,052	-				-0.2
6,091,052	-				+0.1
6,091,052	-				+1.3
6,091,052	-				-0.0
6,091,054	+				-0.9
6,091,054	+				+0.4
6,091,054	+				+0.3
6,091,054	+				+0.7
6,091,054	+				+1.1
6,091,054	+				-0.0
6,091,054	+				+0.3
6,091,054	+				+0.1
6,091,054	+				+0.7
6,091,055	-				-0.4
6,091,055	-				-0.0
6,091,055	-				-0.3
6,091,075	+				-1.0
6,091,075	+				+0.7
6,091,076	-				-2.4
6,091,104	+				+0.3
6,091,104	+				+0.1
6,091,104	+				+0.4
6,091,104	+				+0.2
6,091,104	+				+1.1
6,091,104	+				-0.2
6,091,104	+				+0.1
6,091,104	+				+0.8
6,091,104	+				-0.6
6,091,104	+				+1.8
6,091,104	+				-0.5
6,091,105	-				-0.2
6,091,105	-				+0.4
6,091,105	-				-0.5
6,091,105	-				-0.1
6,091,105	-				+0.0
6,091,105	-				+0.1
6,091,105	-				-0.5
6,091,105	-				-0.6
6,091,105	-				-0.4
6,091,105	-				-1.8
6,091,105	-				+0.3
6,091,105	-				-0.1
6,091,105	-				-0.9
6,091,105	-				+0.5
6,091,105	-				+0.2
6,091,108	+				-1.1
6,091,108	+				-0.8
6,091,108	+				-0.0
6,091,108	+				+0.4
6,091,108	+				+0.7
6,091,108	+				-0.3
6,091,108	+				+0.7
6,091,108	+				+2.4
6,091,108	+				-0.2
6,091,108	+				-0.0
6,091,109	-				+0.6
6,091,109	-				-0.1
6,091,109	-				+0.2
6,091,109	-				-0.7
6,091,109	-				-1.0
6,091,109	-				+0.4
6,091,109	-				+0.8
6,091,109	-				+0.1
6,091,109	-				+0.1
6,091,109	-				+0.5
6,091,109	-				+0.6
6,091,109	-				-0.4
6,091,109	-				-0.7
6,091,109	-				+0.2
6,091,117	+				+0.4
6,091,146	+				-0.8
6,091,147	-				-0.1
6,091,147	-				+0.2
6,091,319	+		Pf6N2E2_5297	0.22	-0.5
6,091,319	-		Pf6N2E2_5297	0.22	-1.2
6,091,319	-		Pf6N2E2_5297	0.22	-2.2
6,091,319	-		Pf6N2E2_5297	0.22	+0.3
6,091,519	+		Pf6N2E2_5297	0.68	+0.3
6,091,519	+		Pf6N2E2_5297	0.68	-0.1
6,091,519	+		Pf6N2E2_5297	0.68	+0.9
6,091,519	+		Pf6N2E2_5297	0.68	-0.4
6,091,520	-		Pf6N2E2_5297	0.69	-0.3
6,091,558	+		Pf6N2E2_5297	0.77	+0.4
6,091,558	+		Pf6N2E2_5297	0.77	-0.5
6,091,559	-		Pf6N2E2_5297	0.78	+0.2
6,091,559	-		Pf6N2E2_5297	0.78	+0.2
6,091,559	-		Pf6N2E2_5297	0.78	+2.7
6,091,559	-		Pf6N2E2_5297	0.78	-0.9
6,091,559	-		Pf6N2E2_5297	0.78	-0.0
6,091,559	-		Pf6N2E2_5297	0.78	+1.1
6,091,562	+		Pf6N2E2_5297	0.78	+0.0
6,091,563	-		Pf6N2E2_5297	0.78	+0.4
6,091,655	+				+1.5
6,091,656	-				+0.3
6,091,671	+				+0.5
6,091,671	+				-0.8
6,091,671	+				-0.1
6,091,671	+				-0.5
6,091,671	+				-0.7
6,091,671	+				+0.1
6,091,671	+				-0.3
6,091,672	-				+0.2
6,091,765	+				-0.2
6,091,886	+		Pf6N2E2_5298	0.17	+1.1
6,091,886	+		Pf6N2E2_5298	0.17	+0.6
6,092,140	+		Pf6N2E2_5298	0.39	-0.0
6,092,141	-		Pf6N2E2_5298	0.39	+0.4
6,092,181	+		Pf6N2E2_5298	0.42	-1.3
6,092,181	+		Pf6N2E2_5298	0.42	+0.7
6,092,395	+		Pf6N2E2_5298	0.60	+0.7
6,092,443	+		Pf6N2E2_5298	0.65	-0.1
6,092,443	+		Pf6N2E2_5298	0.65	-0.3
6,092,477	-		Pf6N2E2_5298	0.67	+0.3
6,092,613	+		Pf6N2E2_5298	0.79	+0.8
6,092,614	-		Pf6N2E2_5298	0.79	-0.8
6,092,614	-		Pf6N2E2_5298	0.79	+0.7