Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2167

Experiment: Sisomicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.0016 mg/ml
2,571,054	+				-0.8
2,571,062	+				-0.1
2,571,063	-				+0.3
2,571,171	+				+0.4
2,571,171	+				-1.2
2,571,171	+				+0.2
2,571,172	-				+0.8
2,571,172	-				+0.5
2,571,172	-				-0.7
2,571,259	-		Pf6N2E2_2166	0.17	-0.7
2,571,259	-		Pf6N2E2_2166	0.17	-0.5
2,571,498	+		Pf6N2E2_2166	0.42	-0.4
2,571,498	+		Pf6N2E2_2166	0.42	-0.8
2,571,498	+		Pf6N2E2_2166	0.42	-0.4
2,571,498	+		Pf6N2E2_2166	0.42	-0.7
2,571,498	+		Pf6N2E2_2166	0.42	-0.8
2,571,499	-		Pf6N2E2_2166	0.42	-0.2
2,571,499	-		Pf6N2E2_2166	0.42	-0.2
2,571,499	-		Pf6N2E2_2166	0.42	+0.3
2,571,499	-		Pf6N2E2_2166	0.42	-0.1
2,571,499	-		Pf6N2E2_2166	0.42	-0.1
2,571,499	-		Pf6N2E2_2166	0.42	-0.1
2,571,499	-		Pf6N2E2_2166	0.42	+0.8
2,571,500	+		Pf6N2E2_2166	0.42	+0.9
2,571,500	+		Pf6N2E2_2166	0.42	+0.0
2,571,500	+		Pf6N2E2_2166	0.42	+0.6
2,571,500	+		Pf6N2E2_2166	0.42	+0.6
2,571,500	+		Pf6N2E2_2166	0.42	-0.3
2,571,500	+		Pf6N2E2_2166	0.42	+0.8
2,571,501	-		Pf6N2E2_2166	0.42	+1.0
2,571,501	-		Pf6N2E2_2166	0.42	+0.2
2,571,501	-		Pf6N2E2_2166	0.42	-0.3
2,571,502	+		Pf6N2E2_2166	0.43	-0.8
2,571,502	+		Pf6N2E2_2166	0.43	-0.0
2,571,502	+		Pf6N2E2_2166	0.43	-0.6
2,571,502	+		Pf6N2E2_2166	0.43	+1.0
2,571,503	-		Pf6N2E2_2166	0.43	-1.5
2,571,503	-		Pf6N2E2_2166	0.43	-0.5
2,571,535	-		Pf6N2E2_2166	0.46	+1.8
2,571,535	-		Pf6N2E2_2166	0.46	+0.7
2,571,718	-		Pf6N2E2_2166	0.65	-0.3
2,571,745	-		Pf6N2E2_2166	0.68	+0.8
2,571,745	-		Pf6N2E2_2166	0.68	+0.0
2,571,838	+		Pf6N2E2_2166	0.78	-0.6
2,571,839	-		Pf6N2E2_2166	0.78	+0.2
2,571,839	-		Pf6N2E2_2166	0.78	-0.1
2,571,839	-		Pf6N2E2_2166	0.78	+0.3
2,571,981	-				-1.0
2,571,999	+				-0.2
2,572,000	-				+0.8
2,572,000	-				+0.5
2,572,000	-				+0.2
2,572,020	-				-1.4
2,572,020	-				-0.1
2,572,044	-				-1.3
2,572,044	-				+0.9
2,572,044	-				+1.1
2,572,055	+				-0.5
2,572,056	-				+0.4
2,572,056	-				+0.1
2,572,056	-				+2.3
2,572,076	+				+0.4
2,572,115	+				+0.5
2,572,115	+				+0.6
2,572,115	+				-1.0
2,572,115	+				+0.8
2,572,116	-				+2.2
2,572,163	+				-0.9
2,572,164	-				+0.2
2,572,164	-				+0.5
2,572,178	+		Pf6N2E2_2167	0.10	-0.0
2,572,178	+		Pf6N2E2_2167	0.10	+0.1
2,572,178	+		Pf6N2E2_2167	0.10	+0.1
2,572,178	+		Pf6N2E2_2167	0.10	-0.2
2,572,179	-		Pf6N2E2_2167	0.10	-1.0
2,572,179	-		Pf6N2E2_2167	0.10	-0.0
2,572,492	+		Pf6N2E2_2167	0.35	-0.5
2,572,628	+		Pf6N2E2_2167	0.45	+0.1
2,572,629	-		Pf6N2E2_2167	0.45	-1.6
2,572,646	+		Pf6N2E2_2167	0.47	+0.0
2,572,796	+		Pf6N2E2_2167	0.58	+0.0
2,572,797	-		Pf6N2E2_2167	0.59	-0.3
2,572,797	-		Pf6N2E2_2167	0.59	+0.1
2,572,797	-		Pf6N2E2_2167	0.59	-1.7
2,572,797	-		Pf6N2E2_2167	0.59	-0.1
2,572,976	+		Pf6N2E2_2167	0.73	+0.5
2,572,976	+		Pf6N2E2_2167	0.73	+0.8
2,572,976	+		Pf6N2E2_2167	0.73	+0.3
2,572,976	+		Pf6N2E2_2167	0.73	+0.8
2,572,976	+		Pf6N2E2_2167	0.73	-0.1
2,572,977	-		Pf6N2E2_2167	0.73	+0.7
2,572,977	-		Pf6N2E2_2167	0.73	+0.5
2,572,977	-		Pf6N2E2_2167	0.73	-0.4
2,572,977	-		Pf6N2E2_2167	0.73	-1.2
2,572,997	+		Pf6N2E2_2167	0.74	-0.3
2,572,998	-		Pf6N2E2_2167	0.74	-0.1
2,572,998	-		Pf6N2E2_2167	0.74	+0.4
2,573,168	-		Pf6N2E2_2167	0.88	+0.5
2,573,168	-		Pf6N2E2_2167	0.88	+0.0
2,573,168	-		Pf6N2E2_2167	0.88	+1.2
2,573,189	+		Pf6N2E2_2167	0.89	+0.9
2,573,197	+		Pf6N2E2_2167	0.90	+0.3
2,573,197	+		Pf6N2E2_2167	0.90	-0.9
2,573,197	+		Pf6N2E2_2167	0.90	-1.7
2,573,197	+		Pf6N2E2_2167	0.90	-0.3
2,573,198	-		Pf6N2E2_2167	0.90	+1.0
2,573,201	+				+0.0
2,573,201	+				-0.9
2,573,201	+				-0.0
2,573,201	+				-0.2
2,573,202	-				-1.0
2,573,202	-				+0.1
2,573,232	-				-0.5
2,573,232	-				-0.2
2,573,240	+				+0.2
2,573,359	+				-0.1
2,573,359	+				+0.1
2,573,359	+				-0.9
2,573,359	+				-0.5
2,573,359	+				-0.1
2,573,359	+				+0.2
2,573,360	-				+0.3
2,573,360	-				-0.6
2,573,360	-				-0.1
2,573,360	-				-0.8
2,573,360	-				-2.5
2,573,360	-				+0.5
2,573,360	-				+0.2
2,573,360	-				+0.2
2,573,360	-				+0.4
2,573,361	+				-0.5
2,573,361	+				-0.7
2,573,361	+				-0.6
2,573,361	+				+1.6
2,573,362	-				+0.4
2,573,362	-				-0.1
2,573,362	-				-0.1
2,573,362	-				-1.7
2,573,362	-				+0.1
2,573,362	-				-0.9
2,573,445	+		Pf6N2E2_2168	0.15	-0.3
2,573,865	+		Pf6N2E2_2168	0.81	+0.3
2,573,865	+		Pf6N2E2_2168	0.81	-0.0
2,573,866	-		Pf6N2E2_2168	0.81	+0.7
2,573,866	-		Pf6N2E2_2168	0.81	+1.1
2,573,901	+		Pf6N2E2_2168	0.86	-0.0
2,573,902	-		Pf6N2E2_2168	0.86	+1.2
2,573,902	-		Pf6N2E2_2168	0.86	-0.2
2,573,902	-		Pf6N2E2_2168	0.86	+0.3
2,573,902	-		Pf6N2E2_2168	0.86	+0.3
2,573,966	+				-0.1
2,573,966	+				+0.8
2,573,966	+				-1.1
2,573,966	+				-1.0
2,573,966	+				+0.6
2,573,966	+				-1.1
2,573,967	-				-0.3
2,574,043	+				+0.3
2,574,043	+				+0.3
2,574,043	+				-0.1
2,574,044	-				+1.6
2,574,044	-				-1.3
2,574,044	-				-0.9
2,574,078	-				+0.1
2,574,078	-				+0.6
2,574,108	+				+0.7
2,574,109	-				+0.4
2,574,135	+				-0.6
2,574,136	-				-2.8
2,574,153	-				-1.3
2,574,162	+				+0.4
2,574,162	+				-0.1
2,574,162	+				+1.1
2,574,162	+				-0.9
2,574,162	+				+1.0
2,574,162	+				+0.8
2,574,163	-				+0.5
2,574,163	-				+0.4
2,574,163	-				+0.8
2,574,163	-				+0.3
2,574,163	-				-0.0
2,574,163	-				-0.2
2,574,163	-				+0.6
2,574,163	-				-0.4
2,574,163	-				+0.8
2,574,163	-				-0.8
2,574,163	-				-0.5
2,574,163	-				-0.3
2,574,163	-				-0.4